BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSE14 (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGL 364 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ ++ P++VGFGI PE +A ADGV+VGSA V + A+SPE+ + Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTSLPISVGFGIRTPEQAAAIARL-ADGVVVGSAFVDKIATAESPEKAI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_LACCA (Tryptophan synthase alpha chain OS=Lactobacillus casei GN=trpA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 47/121 (38.84%), Postives = 77/121 (63.64%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K + ++ TPT+ R++ I +++ GF+Y+VSS+G+TG R ++ L+ EIK+ + P A+GFGI PE Q +AG ADGVI+GSA+V L+ A+ ++ +EKF K ++ A+ Sbjct: 141 KYGIDIIPLITPTSG-HRIEKIAKSASGFIYVVSSMGITGERDEFFAGLKALVAEIKQYTNVPTAIGFGIHTPEQAQTMAGI-ADGVIIGSAIVDLV--AKEKQQAPAAIEKFTKQIRVAV 257
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACSU (Tryptophan synthase alpha chain OS=Bacillus subtilis GN=trpA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.685e-16 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 83 TPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-------AQSPEEGLKELEKFA 385 T R+K I+E +EGFVY VSS+GVTG R + V +R +K ST PVAVGFGIS E V ++ +DGV+VGSA+V+ + E A++ + L+E E +A Sbjct: 151 TSESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVPVAVGFGISNREQVIKM-NEISDGVVVGSALVRKIEELKDRLISAETRNQALQEFEDYA 257 HSP 2 Score: 22.3274 bits (46), Expect = 2.685e-16 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 1 VPLEETESLQKEAMKNKI 54 +PLEE+ SLQ+E +++ Sbjct: 125 LPLEESNSLQEECKSHEV 142
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACNA (Tryptophan synthase alpha chain OS=Bacillus subtilis subsp. natto GN=trpA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.685e-16 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 83 TPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-------AQSPEEGLKELEKFA 385 T R+K I+E +EGFVY VSS+GVTG R + V +R +K ST PVAVGFGIS E V ++ +DGV+VGSA+V+ + E A++ + L+E E +A Sbjct: 151 TSESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVPVAVGFGISNREQVIKM-NEISDGVVVGSALVRKIEELKDRLISAETRNQALQEFEDYA 257 HSP 2 Score: 22.3274 bits (46), Expect = 2.685e-16 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 1 Query: 1 VPLEETESLQKEAMKNKI 54 +PLEE+ SLQ+E +++ Sbjct: 125 LPLEESNSLQEECKSHEV 142
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_SYNAS (Tryptophan synthase alpha chain OS=Syntrophus aciditrophicus (strain SB) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 43/118 (36.44%), Postives = 66/118 (55.93%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L + PTT +RM I ++GF+Y +S GVTG +V+ +R I+ S P+ VGFGIS PE +++A ADG+++GSA V+L+ E E + FA+ +K A+ Sbjct: 147 LDFITLIAPTTSEERMCRIARRAQGFIYYISITGVTGTATPSRDNVEREIRRIRTHSDLPLVVGFGISTPEQARELASL-ADGIVIGSAFVRLIAENADSPELAARVSSFAREIKKAM 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEU2 (Tryptophan synthase alpha chain OS=Pseudomonas syringae pv. syringae (strain B728a) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGL 364 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA V + A+SPE + Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAAAIARL-ADGVVVGSAFVDKIASAESPEHAI 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEAB (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 373 L + TTPTT R+ ++E S GFVY VS GVTGA A+ HV+ + ++ + P+ +GFGI EH VA ADGV+VGSA++ + +A+ + +K++ Sbjct: 148 LDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARL-ADGVVVGSALIDRIAKARDNAQAVKDV 253
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEA8 (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa (strain LESB58) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 373 L + TTPTT R+ ++E S GFVY VS GVTGA A+ HV+ + ++ + P+ +GFGI EH VA ADGV+VGSA++ + +A+ + +K++ Sbjct: 148 LDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARL-ADGVVVGSALIDRIAKARDNAQAVKDV 253
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_LACPL (Tryptophan synthase alpha chain OS=Lactobacillus plantarum GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 47/118 (39.83%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 ++L+ PT+ R+ AI + + GF+Y+VSS+GVTG R I+ + TL+ +I+ ++T PVA+GFGI +P Q +A ADGVIVGSA+V L+ Q L++ + + ++ AL Sbjct: 143 IALIPLIAPTSDDARIAAIAQQARGFIYVVSSLGVTGTRRHITTDLATLVAKIRHATTLPVAIGFGIHEPAQAQAMAQI-ADGVIVGSAVVHLIATHQPATAVLRD---YTRRMRRAL 256
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_DEHSC (Tryptophan synthase alpha chain OS=Dehalococcoides sp. (strain CBDB1) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 41/118 (34.75%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L ++ PT+ +R+K + S GF+YLVS GVTGA A++ + + + +++++ +P+AVGFGIS PE Q +A + +DG+IVGS +++L+ + L+++ F + L+ +L Sbjct: 142 LDIIFLLAPTSTDERIKLVAAKSRGFIYLVSHSGVTGATANLPADLSSFVNRVRKTARQPLAVGFGISTPEQAQNIAKF-SDGIIVGSRILQLV----QTDPSLEKVATFIRQLRQSL 254 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |