BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_DEHSB (Tryptophan synthase alpha chain OS=Dehalococcoides sp. (strain BAV1) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 41/118 (34.75%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L ++ PT+ +R+K + S GF+YLVS GVTGA A++ + + + +++++ +P+AVGFGIS PE Q +A + +DG+IVGS +++L+ + L+++ F + L+ +L Sbjct: 142 LDIIFLLAPTSTDERIKLVAAKSRGFIYLVSHSGVTGATANLPADLSSFVNRVRKTARQPLAVGFGISTPEQAQNIAKF-SDGIIVGSRILQLV----QTDPSLEKVATFIRQLRQSL 254
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_DEHE1 (Tryptophan synthase alpha chain OS=Dehalococcoides ethenogenes (strain 195) GN=trpA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 41/118 (34.75%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L ++ PT+ +R+K + S GF+YLVS GVTGA A++ + + + +++++ +P+AVGFGIS PE Q +A + +DG+IVGS +++L+ + L+++ F + L+ +L Sbjct: 142 LDIIFLLAPTSTDERIKLVAAKSRGFIYLVSHSGVTGATANLPADLSSFVNRVRKTARQPLAVGFGISTPEQAQNIAKF-SDGIIVGSRILQLV----QTDPSLEKVATFIRQLRQSL 254
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_RHOSK (Tryptophan synthase alpha chain OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=trpA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+ + TPTT + R+ +++ + GFVY VS G+TGA A+ + V + IK ++ PV VGFGI+ PE Q +AG ADG +VGSA+VKL+GE + E L + A +A Sbjct: 148 LNFIRLATPTTDSRRLPKVLQNTSGFVYYVSITGITGAAAAQAVDVAPEVARIKAATDLPVIVGFGITTPEAAQDLAGI-ADGCVVGSAIVKLVGEGRPVAEVLDRVAALAAGAHAA 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPG (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain GB-1) GN=trpA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA+V + +A+S ++ + ++ +L Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAANIARL-ADGVVVGSALVDKIAQAKSADQAVNDVLSLCSAL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_NOVAD (Tryptophan synthase alpha chain OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=trpA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEG-LKEL 373 +SL+ TPTT R+ A++E S GF+Y VS G+TG + + ++ + IK+S+T PVAVGFG+ PE +A ADGV+VGSA+V L+ + G +KEL Sbjct: 144 VSLIRLATPTTDAARLPAVLEGSSGFLYYVSVAGITGMQQAAQASIEEAVARIKQSATIPVAVGFGVRTPEQAAAIAK-VADGVVVGSALVDLVARHGADAAGPVKEL 250
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ERYLH (Tryptophan synthase alpha chain OS=Erythrobacter litoralis (strain HTCC2594) GN=trpA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 47/115 (40.87%), Postives = 71/115 (61.74%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 + TPTT R+ A++E EGFVY VS G+TG + + +++ + IK S+ PVAVGFG+ PE +A ADGV+VGSA+V+L+GE + E +L++ K+L A+ Sbjct: 144 IRLATPTTDAKRLPAVLEGCEGFVYYVSVAGITGKQQAALDTIESNVARIKRSTDLPVAVGFGVRTPEQAGAIAR-VADGVVVGSALVELVGEFGT--EAPAKLQELTKALADAV 255
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CYAME (Tryptophan synthase alpha chain OS=Cyanidioschyzon merolae GN=trpA PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 41/117 (35.04%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 403 L+++ +PTT R + + A + ++Y++S GVTG + L+ E+K+ + P+A+GFGISK E V+ V WGADGVI+GSA +++L E+G+ +L ++ +K + Sbjct: 129 LNIIWLISPTTNKTRAQELARACKDWIYVISRTGVTGLETEFDKQIPKLIGELKKVTKAPIALGFGISKSEQVKLVKSWGADGVIIGSACMQIL-----LEKGVDQLSEWISVMKKS 240
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPK (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain KT2440) GN=trpA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.862e-16 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA+V + +A+S ++ + ++ +L Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAANIARL-ADGVVVGSALVDKIAQAKSADQAVTDVLSLCSAL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEP1 (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=trpA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.862e-16 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA+V + +A+S ++ + ++ +L Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAANIARL-ADGVVVGSALVDKIAQAKSADQAVTDVLSLCSAL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEAE (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa GN=trpA PE=3 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 5.862e-16 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 373 + + TTPTT R+ ++E S GFVY VS GVTGA A+ HV+ + ++ + P+ +GFGI EH VA ADGV+VGSA++ + +A+ + +K++ Sbjct: 148 IDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARL-ADGVVVGSALIDRIAKARDNAQAVKDV 253 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |