BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEA7 (Tryptophan synthase alpha chain OS=Pseudomonas aeruginosa (strain PA7) GN=trpA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.862e-16 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL 373 + + TTPTT +R+ ++E S GFVY VS GVTGA A+ HV+ + ++ + P+ +GFGI EH VA ADGV+VGSA+++ + +A +K++ Sbjct: 148 IDFIRLTTPTTGDERLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARL-ADGVVVGSALIERIAKAGDTARAVKDV 253
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_THEP3 (Tryptophan synthase alpha chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 45/121 (37.19%), Postives = 73/121 (60.33%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K + L+ PT+ +R+K I E +GFVY VS GVTGAR I ++ ++ + + + P A+GFGIS PE +++ + +DG+IVGSA+V+ + + + E L+E++ F LK L Sbjct: 144 KYGIYLIPLVAPTSK-ERIKLITENGKGFVYCVSITGVTGAREDIETDIEEYMKTVSQYTNMPKAIGFGISTPEMAKKLKDF-SDGIIVGSALVERIAKGYNKSEMLQEVKSFVSILKEVL 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPU (Tryptophan synthase alpha chain OS=Pseudomonas putida GN=trpA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA+V + +A S ++ + ++ +L Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAANIARL-ADGVVVGSALVDKIAQATSADQAVNDVLSLCSAL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOSM (Tryptophan synthase alpha chain OS=Geobacter sp. (strain M21) GN=trpA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L L+ TPT+ + R+ + GF+Y VS GVTGAR++++ + + E++ + P+ VGFGIS PE +VA ADGV+VGSA+VK + Q E L++L F +LK + Sbjct: 147 LDLIFLLTPTSDSSRVAMVARQGSGFIYYVSVTGVTGARSAVADDLAARVTEVRGALELPLVVGFGISTPEQAGEVA-QAADGVVVGSALVKYFEKYQGAEL-LEQLGGFVSALKQGV 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_AZOVD (Tryptophan synthase alpha chain OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 L + TTPTT R+ ++ S GFVY VS GVTGA A+ HV+ + ++ + P+ +GFGI PEH VA A+GV+VGSA+V + +A S E+ + ++ + L Sbjct: 148 LDFIRLTTPTTDDKRLPRVLAGSSGFVYYVSVAGVTGAHAASLEHVEQAVARLRRHTDLPLCIGFGIRSPEHAGSVARL-AEGVVVGSALVDRIAKAGSKEQAVGDVLGLCREL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PELPD (Tryptophan synthase alpha chain OS=Pelobacter propionicus (strain DSM 2379) GN=trpA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSALP 409 L + TPT+ R+ + GFVY V+ GVTGAR +S + L +++ + P+ GFGIS P+ VA ADGV+VGSA+VKL + S EE +E+ +F SL+ A+P Sbjct: 147 LQVAFLLTPTSTDSRIATVGRLGRGFVYYVTVTGVTGARQQVSTTLGGELAKVRAKISVPIVAGFGISTPQQAADVAAM-ADGVVVGSALVKLF-QLHSGEELRQEVTRFVASLRQAIP 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_MYCIT (Tryptophan synthase alpha chain OS=Mycobacterium intracellulare GN=trpA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 48/119 (40.34%), Postives = 65/119 (54.62%), Query Frame = 2 Query: 50 RLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 RL + P++ R+ VEAS GFVY S++GVTGAR +S L+ +KE S PV VG G+ E Q+ G+ ADGVIVGSA+V LG+ GL L + L + + Sbjct: 152 RLDRIFLVAPSSTPQRLAMTVEASRGFVYAASTMGVTGARDVVSNAAPELVGRVKEISDIPVGVGLGVRSGEQAAQIGGY-ADGVIVGSALVSALGDG-----GLTALRALTEELAAGV 264
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOBB (Tryptophan synthase alpha chain OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=trpA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L L+ TPT+ R+ ++ GF+Y VS GVTGAR++++ + + E++ + P+ VGFGIS PE +VA ADGV+VGSA+VK + Q E L++L F +LK + Sbjct: 147 LDLIFLLTPTSDGSRIASVARQGSGFIYYVSVTGVTGARSAVADDLAARVTEVRGALELPLVVGFGISTPEQAGEVAR-AADGVVVGSALVKYFEKYQGAEL-LEQLGGFVSALKQGV 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_CARHZ (Tryptophan synthase alpha chain OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=trpA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKS 400 L L+ PTT R++ IV + GF+Y VS GVTGAR S+ V +LL+ +K+ + PV +GFGI KPE + + + DGVIVGSA+V+++ Q+ E K LE A +++ Sbjct: 147 LDLIPLVAPTTGQKRLEKIVGQASGFIYCVSVTGVTGARDSLPAEVISLLQNVKKLTELPVCLGFGIGKPEQIAYIKDY-CDGVIVGSALVEIIENYVQNRMEKDKVLELIATKVQT 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEE4 (Tryptophan synthase alpha chain OS=Pseudomonas entomophila (strain L48) GN=trpA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15 Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA+V + +A+ + +K++ +L Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAAAIARL-ADGVVVGSALVDKIAQAKDAGQAVKDVLSLCSAL 260 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |