BQ623328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PHEZH (Tryptophan synthase alpha chain OS=Phenylobacterium zucineum (strain HLK1) GN=trpA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15 Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEG-----LKELEKFAKSLKSA 403 +SL+ TPTT R+K +V + GFVY VS GVTG + + + V + ++++S PVAVGFGI PE QVA AD V+VGSA+V + EA E L ++E AK+++ A Sbjct: 150 VSLIRLATPTTGDARLKVVVRRTSGFVYYVSVAGVTGVKEADAAAVAPNVERVRKASGLPVAVGFGIKTPERAAQVA-QVADAVVVGSALVDEVAEAVDMNEDVTARVLSKVESLAKAVRLA 270
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_DESAA (Tryptophan synthase alpha chain OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 62 VLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKEL-EKFAKSLKSA 403 + PTT DRMK I + GF+YLVS GVTG++ S V + +K + PV VGFGIS PEHV+ VA +DGV+VGSA +L+ E GL + +++ +SLK+A Sbjct: 150 IRLVAPTTGQDRMKQIAGEASGFIYLVSMTGVTGSQGLDSSKVADVNAPLKAVTDLPVCVGFGISTPEHVKAVAA-VSDGVVVGSAFERLI-EENLENRGLHTMVQEYTESLKAA 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACA2 (Tryptophan synthase alpha chain OS=Bacillus amyloliquefaciens (strain FZB42) GN=trpA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15 Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWG--ADGVIVGSAMVKLLGEAQSP-------EEGLKELEKFAKS 391 K ++ + PT+ DR+K I E + GFVY VSS+GVTG R+ V + +R++KE S+ PVAVGFGIS + +QV G +DGV+VGSA+VK + E ++ + L E E++AK+ Sbjct: 137 KENIAYISLVAPTSE-DRLKIITEQACGFVYCVSSLGVTGVRSEFDPSVYSFIRKVKEFSSVPVAVGFGIS---NRKQVDGMNEISDGVVVGSALVKKIEELKTKLVNPGTRADALLEFEEYAKT 257
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_AQUAE (Tryptophan synthase alpha chain OS=Aquifex aeolicus GN=trpA PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.306e-15 Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASIS-GHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 K LS V PT+ R+K I EA++ Y VS G TGAR + ++ + E +E KPV VGFG+SK EH +++ + ADGV+VGSA+VKL G+ + +++L K LK L Sbjct: 145 KYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSF-ADGVVVGSALVKLAGQKK-----IEDLGNLVKELKEGL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_VIBME (Tryptophan synthase alpha chain OS=Vibrio metschnikovii GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 44 KIRLSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLL-GEAQSPEEGLKELEKFAKSLKSA 403 K + + PT + ++++ E G+ YL+S GVTGA + V LL + + S P +GFGIS+PE V+Q GA G I GSA+VK++ PE L EL+ F ++KSA Sbjct: 143 KYAIHPIFIAPPTASDETLQSVAELGSGYTYLLSRSGVTGAETKANMPVHALLERLNQFSAPPRRLGFGISEPEQVKQAIESGAAGAISGSAVVKIIEHHLAKPEAMLAELKTFVSAMKSA 263
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_ROSCS (Tryptophan synthase alpha chain OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLK 397 L L+ F PTTP +R+ I + GF+Y VS GVTGAR + + L ++ +T P+ VGFGIS +HV++V G A G IV SA++ ++ E P E + +F + L+ Sbjct: 148 LDLIFFVAPTTPDERIARITALASGFIYCVSLTGVTGARRELWSGLPAFLERVRRHTTLPLVVGFGISSADHVREV-GRHAAGAIVASALINVI-EQSHPGEYVARAAEFVRLLR 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_PSEPW (Tryptophan synthase alpha chain OS=Pseudomonas putida (strain W619) GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSL 394 + + TTPTT R+ ++E S GFVY VS GVTGA ++ + HV + ++ + P++VGFGI PE +A ADGV+VGSA+V + +A+ ++ + ++ +L Sbjct: 148 IDFIRLTTPTTDDARLPRVLERSSGFVYYVSVAGVTGAGSATTEHVTEAIARLRRHTDLPISVGFGIRTPEQAAAIARL-ADGVVVGSALVDKIAQAKDADQAVADVLSLCSAL 260
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOUR (Tryptophan synthase alpha chain OS=Geobacter uraniireducens (strain Rf4) GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 406 L ++ TPT+ R++ + GF+Y VS GVTGAR S++ V +++I+E T P+ VGFGIS P +VA ADGV+VGSA+VKL E + +E + L F +LK+ + Sbjct: 147 LDVIFLLTPTSDEARIRKVANLGSGFIYYVSVTGVTGARTSVADTVFPDVKKIREHVTLPLVVGFGISDPVQAGRVAA-VADGVVVGSALVKLFEEFRG-DELRERLGGFVAALKAGV 262
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_GEOKA (Tryptophan synthase alpha chain OS=Geobacillus kaustophilus GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMV----KLLGEAQSPEE---GLKELEKFAKSLKSAL 406 L L+ PT+ R++ I A++GF+Y VSS+GVTG R ++ + LRE+K S PVAVGFGIS PE V + DGV+VGSA+V +L Q+P+E + E +A+SL + L Sbjct: 139 LPLISLVAPTSK-QRIERIASAAQGFLYCVSSLGVTGVRETLPETLGDFLREVKRHSRVPVAVGFGISAPEQVAMLKE-VCDGVVVGSALVQKVEQLAPRLQTPDEREAAVAEFAAYARSLAAPL 261
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Match: TRPA_BACP2 (Tryptophan synthase alpha chain OS=Bacillus pumilus (strain SAFR-032) GN=trpA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.228e-15 Identity = 48/120 (40.00%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 53 LSLVLFTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGARASISGHVQTLLREIKESSTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGE-------AQSPEEGLKELEKFAKS 391 +S + PT+ +R+ IVE +EGFVY VSS+GVTG R + + ++++K+ S PVAVGFGIS E V + +DGV+VGSA+VK + E + + ++ L+E E +AK+ Sbjct: 142 ISYISLVAPTSK-ERLVNIVEQAEGFVYCVSSLGVTGVRQTFDESITDFIQQVKQLSHIPVAVGFGISTREQVDSMNKL-SDGVVVGSALVKKIEELHDQLLASDTRQDALREFETYAKT 259 The following BLAST results are available for this feature:
BLAST of BQ623328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 363
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623328 ID=BQ623328; Name=BQ623328; organism=Citrus sinensis; type=EST; length=575bpback to top |