BQ623332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.589e-19 Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 141 LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 217 LAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.381e-19 Identity = 43/47 (91.49%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 141 LAMFSMFGFFVQAIVTGKGPLE+LADH+ADPVNNNAW ATNFVPGK Sbjct: 220 LAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.416e-19 Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 141 LAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPV NNAWAYATNFVPGK Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.768e-19 Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 141 LAMFSMFGFFVQAIVTGKGP+ENL+DHLADP NNAWAYATNF PGK Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPGK 265
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.533e-19 Identity = 42/47 (89.36%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 141 LAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.883e-18 Identity = 40/47 (85.11%), Postives = 45/47 (95.74%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 141 LAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+ Sbjct: 219 LAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.398e-17 Identity = 40/46 (86.96%), Postives = 41/46 (89.13%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 138 LAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 219 LAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.571e-16 Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 138 LAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG Sbjct: 222 LAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.679e-16 Identity = 40/46 (86.96%), Postives = 40/46 (86.96%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 138 LAMFSMFGFFVQAIVTGKGPLENL DHLADPV NNAWAYA PG Sbjct: 222 LAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.277e-14 Identity = 36/45 (80.00%), Postives = 39/45 (86.67%), Query Frame = 1 Query: 1 LAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 135 LAMFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 210 LAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254 The following BLAST results are available for this feature:
BLAST of BQ623332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623332 ID=BQ623332; Name=BQ623332; organism=Citrus sinensis; type=EST; length=356bpback to top |