BQ623337

Overview
NameBQ623337
Unique NameBQ623337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  224 PNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  224 PNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.609e-16
Identity = 42/138 (30.43%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 415
            P    GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  270 PGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            P+++  DIVFV++ KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  224 PNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            P ++  DIVFV++ K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  224 PTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.451e-16
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  235 PDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.451e-16
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  235 PDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.451e-16
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 2
Query:    2 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  235 PDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-14
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 2
Query:    5 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  229 NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339          
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-14
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 2
Query:    5 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 343
            + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  229 NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
The following BLAST results are available for this feature:
BLAST of BQ623337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
DNJB4_PONAB6.867e-1738.60DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN6.867e-1738.60DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJA1_DICDI2.609e-1630.43DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB4_MOUSE3.408e-1638.60DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN3.408e-1638.60DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB5_MOUSE4.451e-1639.47DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN4.451e-1639.47DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN4.451e-1639.47DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB1_MOUSE1.096e-1438.94DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJB1_HUMAN1.096e-1438.94DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00428 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00428 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623337 ID=BQ623337; Name=BQ623337; organism=Citrus sinensis; type=EST; length=569bp
GCCCGACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGC
ACCCGAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTG
TCACTGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGA
TGGCCGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGG
ACCAATTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCA
TTTATGAGGGGCAAACTGTACATTCATTTCAGTGTTGACTTCCCTGAGTC
ACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGA
CCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACC
CTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGC
TCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAG
TGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTT
AGTATTTTCATTGGTTGGG
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