BQ623360

Overview
NameBQ623360
Unique NameBQ623360
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10264 contig Csv1_Contig10264:368..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.682e-40
Identity = 91/223 (40.81%), Postives = 136/223 (60.99%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTS-DHEALTNMKTEFMALWDGF-----TTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            K+ L E V+LP+  PE F    +  P KGVL+ GPPGTGKT+LAKA+A E    F NV  S L SK+ G+++KLV  +F +A    P  IFIDE+DS   +R TS +HEA   +K E +   DG        D +  VMVLAATN P ++DEA+ RRL +   I +P  K R ++L++ L+  ++ +++D   +A   EG++G+D+  VC+ A+  ++R  ++
Sbjct:  219 KKLLKEAVVLPMWMPEFFKG--IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRRRIE 439          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: TERA2_CAEEL (Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.711e-39
Identity = 87/216 (40.28%), Postives = 135/216 (62.50%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            E+V LPLR P+LF   K +G  P +G+LL+GPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F+   K  PAI+FIDE+D+   +R  +  E    + ++ + L DG  T   A V+V+AATNRP+ +D A+ R  R  +  +IG+PD   R +IL++  K  K+ E++D + +A  C GF G+DL  +C +AA   IRE ++
Sbjct:  223 EMVELPLRHPQLF---KAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKT--RAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433          

HSP 2 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L ELV  P+  PE +    +  P +GVL YGPPG GKT+LAKAIA E  A FI+++   L++ WFG+++  V  VF  A    P ++F DE+DS    R  S  +   A   +  + +   DG    +N  V ++ ATNRP  +D A+LR  RL Q   I +PD   R QI K  L+   +  ++D ++LA    GF+G+DL E+C++A   +IRE ++
Sbjct:  490 VKRELQELVQYPVEHPEKYLKFGMQ-PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKN--VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIE 709          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: KTNA1_XENTR (Katanin p60 ATPase-containing subunit A1 OS=Xenopus tropicalis GN=katna1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.711e-39
Identity = 89/223 (39.91%), Postives = 137/223 (61.43%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTS-DHEALTNMKTEFMALWDGF-----TTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            K+ L E V+LP+  PE F    +  P KGVL+ GPPGTGKT+LAKA+A E    F N+  S L SK+ G+++KLV  +F +A    P  IFIDE+DS   +R TS +HEA   +K E +   DG        D +  VMVLAATN P ++DEA+ RRL +   I +P  K R ++L++ LK  ++ ++++ + +A   +G++G+D+  VC+ A+  ++R  ++
Sbjct:  219 KKLLKEAVVLPMWMPEFFKG--IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIE 439          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: KTNA1_XENLA (Katanin p60 ATPase-containing subunit (Fragment) OS=Xenopus laevis GN=katna1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.711e-39
Identity = 89/223 (39.91%), Postives = 137/223 (61.43%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTS-DHEALTNMKTEFMALWDGF-----TTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            K+ L E V+LP+  PE F    +  P KGVL+ GPPGTGKT+LAKA+A E    F N+  S L SK+ G+++KLV  +F +A    P  IFIDE+DS   +R TS +HEA   +K E +   DG        D +  VMVLAATN P ++DEA+ RRL +   I +P  K R ++L++ LK  ++ ++++ + +A   +G++G+D+  VC+ A+  ++R  ++
Sbjct:  215 KKLLKEAVVLPMWMPEFFKG--IRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIE 435          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: CDC48_SCHPO (Cell division cycle protein 48 OS=Schizosaccharomyces pombe GN=cdc48 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.711e-39
Identity = 88/216 (40.74%), Postives = 134/216 (62.04%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ELV LPLR P+LF   K +G  P +G+L+YGPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  PAIIFIDE+DS   +R  ++ E    + ++ + L DG     N  V+V+AATNRP+ +D A+ R  R  +  ++G+PD   R +IL++  K  K+ +++D + +A    G+ GSDL  +C +AA   IRE +D
Sbjct:  238 ELVELPLRHPQLF---KSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSN--VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMD 448          

HSP 2 Score: 138.272 bits (347), Expect = 3.456e-32
Identity = 82/222 (36.94%), Postives = 127/222 (57.21%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTS--DHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            +K+ L E V +P+   E F    +  P KGVL +GPPGTGKT+LAKAIA E  A FI+V+   L+S WFG+++  V  +F  A    P ++F+DE+DS    R  S  D      +  + +   DG  + +N  V V+ ATNRP ++D A++R  RL Q   + +PD + R  IL+  L+   V E++D   +A    GF+G+DL  V ++A   +I++ ++
Sbjct:  505 VKRELRETVQMPVMYAEKFLRFGVT-PSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKN--VFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIE 723          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.711e-39
Identity = 90/216 (41.67%), Postives = 133/216 (61.57%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            ELV LPLR P+LF   K +G  P +G+L+YGPPGTGKT++A+A+A E+GA F  +    +MSK  G+++  +   F  A K  PAIIFIDE+DS   +R  ++ E    + ++ + L DG     N  V+V+AATNRP+ +D A+ R  R  +  +IG+PD   R +IL +  K  K+ E++D + +A    G+ GSDL  +C +AA   IRE +D
Sbjct:  243 ELVELPLRHPQLF---KSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSN--VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMD 453          

HSP 2 Score: 145.976 bits (367), Expect = 1.658e-34
Identity = 85/220 (38.64%), Postives = 127/220 (57.73%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHE---ALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRE 647
            +K+ L E V  P+  PE F    L  P +GVL YGPPGTGKTMLAKA+A E  A FI+V+   L+S WFG+++  +  +F  A    P ++F+DE+DS    R  S  +   A   +  + +   DG T+ +N  V V+ ATNRP +LD A++R  RL     + +PD+  R  ILK  L+   V  ++D +++A    GF+G+DL  V ++A   +I+E
Sbjct:  511 VKRELIESVQYPVDHPEKFQKFGL-SPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKN--VFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKE 727          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.235e-39
Identity = 90/215 (41.86%), Postives = 136/215 (63.26%), Query Frame = 3
Query:   21 ELVILPLRRPELFSHGKLLG--PQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELL 653
            E++ LPL+ PELF     LG  P KGVLLYGPPGTGKT++AKA+A E  A FI +    +MSK++G++++ +  +F  A +  P+IIFIDE+DS   +R     E    +  + +AL DG   +    V+V+AATNRP  +D A+ R  R  +  EIG+PD++ R +IL++  +   + E++D + LA L  GF G+DL  +CK+AA  ++R +L
Sbjct:  196 EMIELPLKHPELFQR---LGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVVAQLLALMDGL--EARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVL 405          

HSP 2 Score: 162.155 bits (409), Expect = 2.235e-39
Identity = 89/219 (40.64%), Postives = 139/219 (63.47%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQR-RTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELL 653
            KQ L E V  PL+ PE+F    +  P +G+LL+GPPGTGKT+LAKA+A ES A FI+V+   L+SKW G+++K V  +F  A ++ P +IF DE+DS   +R    D      + ++ +   DG   ++   V+V+AATNRP  +D A+LR  RL +   I  PD+K R +I K+ L+G+ + ++++ + LA   EG++G+D+  VC++A   +IREL+
Sbjct:  464 KQELMEAVEWPLKYPEVFRAANIK-PPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGL--EELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELI 679          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.919e-39
Identity = 88/219 (40.18%), Postives = 133/219 (60.73%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            KQ + E+V  P+R PELF    +  P KG+LLYGPPGTGKT+LA+A+A E GA FI V    +MSK++G++++ +  +F  A +  P+IIFIDE+D+   +R     E    +  + + L DG       RV+V+ ATNRP  +D A+ R  R  +  EI  PD K R  IL+V  +   + +++D D LA +  G+TG+DL  + K+AA +++R  +D
Sbjct:  221 KQKIREIVEWPMRHPELFQRLGI-DPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGI--KGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVD 436          

HSP 2 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 90/219 (41.10%), Postives = 132/219 (60.27%), Query Frame = 3
Query:    3 IKQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTSDHEALT-NMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILR--RLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIREL 650
            +KQ L E V  PLR PELF+   +  P KG+LL+GPPGTGKTMLAKA+A ESGA FI VR   ++SKW G+++K +  +F  A +  P +IF DE+DS    R  S    +T  +  + +A  DG       +V+++AATNRP  LD A+LR  R  +   +  PD+  R +ILKV  K   + E++  + +A   EG+TG+DL  + ++A   ++R +
Sbjct:  495 VKQQLREAVEWPLRFPELFTKSGVT-PPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLN--KVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSI 710          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: SAP1_YEAST (Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.919e-39
Identity = 92/237 (38.82%), Postives = 140/237 (59.07%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRT-SDHEALTNMKTEFMALWDGFTT------------------DQNARVMVLAATNRPSELDEAILRRLPQAFEIGMP-DRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIRELLD 656
            K +L E V+ P  RP+LF    L  P +G+LL+GPPGTGKTMLA+A+A ES + F ++  S+L SK+ G+++KLV A+F++A KL P+IIF+DE+DS +G R   +++E+   +K EF+  W   ++                  + + RV+VLAATN P  +DEA  RR  +   I +P D+    Q  K++   +      DFD L  + EG++GSD+  + K AA   +R+L D
Sbjct:  614 KYSLKEAVVYPFLRPDLFRG--LREPVRGMLLFGPPGTGKTMLARAVATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAARRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDAAMGPLRDLGD 848          
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Match: KTNA1_ARATH (Katanin p60 ATPase-containing subunit OS=Arabidopsis thaliana GN=AAA1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.919e-39
Identity = 91/220 (41.36%), Postives = 135/220 (61.36%), Query Frame = 3
Query:    6 KQALYELVILPLRRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTS-DHEALTNMKTEFMALWDGF----TTDQNAR--VMVLAATNRPSELDEAILRRLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVCKQAAYFSIR 644
            K+ L E V+LPL  PE F    +  P KGVL++GPPGTGKT+LAKA+A E G  F NV  + L SKW G+++++V  +F LA    P+ IFIDE+DS    R  S +HE+   +K+E +   DG     T +  +R  VMVLAATN P ++DEA+ RRL +   I +PD + R  ++ + L+  +V  +++ + +A   EG++G DL  VC+ A+   +R
Sbjct:  248 KRLLEEAVVLPLWMPEYFQG--IRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMR 465          
The following BLAST results are available for this feature:
BLAST of BQ623360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
KTNA1_CHICK7.682e-4040.81Katanin p60 ATPase-containing subunit A1 OS=Gallus... [more]
TERA2_CAEEL1.711e-3940.28Transitional endoplasmic reticulum ATPase homolog ... [more]
KTNA1_XENTR1.711e-3939.91Katanin p60 ATPase-containing subunit A1 OS=Xenopu... [more]
KTNA1_XENLA1.711e-3939.91Katanin p60 ATPase-containing subunit (Fragment) O... [more]
CDC48_SCHPO1.711e-3940.74Cell division cycle protein 48 OS=Schizosaccharomy... [more]
CDC48_EMENI1.711e-3941.67Cell division control protein 48 OS=Emericella nid... [more]
Y1297_ARCFU2.235e-3941.86Cell division cycle protein 48 homolog AF_1297 OS=... [more]
SAV_SULAC2.919e-3940.18Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
SAP1_YEAST2.919e-3938.82Protein SAP1 OS=Saccharomyces cerevisiae GN=SAP1 P... [more]
KTNA1_ARATH2.919e-3941.36Katanin p60 ATPase-containing subunit OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00451 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00451 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623360 ID=BQ623360; Name=BQ623360; organism=Citrus sinensis; type=EST; length=658bp
CTATCAAGCAAGCTTTGTATGAATTGGTGATTCTTCCTTTACGAAGGCCG
GAGTTGTTTTCTCATGGGAAGCTTCTCGGTCCCCAGAAAGGAGTTCTGTT
GTATGGACCTCCTGGTACCGGAAAGACCATGCTTGCCAAAGCTATTGCAA
AAGAGTCCGGTGCTGTTTTCATTAATGTTAGGATATCAAATTTGATGAGC
AAGTGGTTTGGTGATGCTCAGAAACTCGTGGCTGCTGTATTTAGCTTGGC
CTATAAACTCCAGCCTGCTATTATATTTATTGATGAGGTTGACAGCTTTT
TGGGTCAGCGTCGTACTTCAGACCATGAAGCATTGACAAATATGAAGACT
GAGTTTATGGCTTTATGGGATGGGTTTACAACAGATCAAAATGCCCGTGT
GATGGTTCTTGCGGCAACTAATCGTCCGTCAGAACTTGATGAAGCAATAC
TTCGGCGTCTCCCTCAAGCCTTTGAAATTGGGATGCCAGACCGCAAGGAG
AGGGCTCAGATACTGAAGGTGATTTTAAAGGGTGAGAAGGTCGAAGAGAA
CATAGACTTTGACTATTTAGCCGGTTTGTGTGAGGGATTCACGGGTTCAG
ACCTTCTTGAAGTTTGCAAGCAAGCAGCCTACTTTTCTATTAGGGAACTA
CTAGATGA
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