BQ623381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSB3A_ARATH (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.626e-14 Identity = 41/129 (31.78%), Postives = 67/129 (51.94%), Query Frame = 2 Query: 41 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 427 S ++ NG VA+ G + A+D R+ ++ D+ +I K+ D+ + SG DV+ L + L RH +YQ + + M L+S LY KRF PY V+ GL ++ K + T D++G+ E Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTMDSIGAKE 130
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSB3_ORYSJ (Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica GN=PBC1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14 Identity = 39/129 (30.23%), Postives = 65/129 (50.39%), Query Frame = 2 Query: 41 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 427 S ++ NG VA+ G + A+D R+ ++ D+ ++ K+ DK + SG D + L + L RH +YQ + + M L+S LY KRF PY+ V+ GL + + + T D +G+ E Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMDCIGAKE 130
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSB3_DICDI (Proteasome subunit beta type-3 OS=Dictyostelium discoideum GN=psmB3 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14 Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 56 NGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLD 376 NGG C+ + G + A+D R +S D+ K+ ++ DKC + SG D + L + L RH +Y+ + + MS + LL+N LY KRF PY++ ++ GL+ Sbjct: 7 NGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDAQTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLE 113
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-13 Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 59 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLK 496 G T V I +D V AAD R S G + +++ +KI K+ + +A +G D+ L +LL A +Y Q K+MS A+ LL+N L R PY ++ ++GG D + + +Y+ D +G Y + GSG LD++ + Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPR--LYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYR 153
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.107e-13 Identity = 43/147 (29.25%), Postives = 79/147 (53.74%), Query Frame = 2 Query: 59 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAV-GSYERVGYSSQGSGSTLIMPFLDNQLK 496 G T V + D V A++ R + G+ I S+ K+ ++ D M ++G D + L +L++ +Y+ + ++ M+ + L+SN L R++P ++GG+D G G +Y+ DA+ GS E S+ GSGS + L++Q + Sbjct: 9 GTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPG-IYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYR 154 HSP 2 Score: 23.483 bits (49), Expect = 1.107e-13 Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 586 SATERDIYTGNKLEIGVLTKMGF 654 +AT+RD +G +++ V+TK F Sbjct: 172 NATKRDSASGENIDVVVITKEAF 194
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSB3B_ARATH (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana GN=PBC2 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.296e-13 Identity = 40/129 (31.01%), Postives = 66/129 (51.16%), Query Frame = 2 Query: 41 SPYDNNGGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYE 427 S ++ NG VA+ G + A+D R+ ++ D+ +I K+ D + SG DV+ L + L RH +YQ + + M L+S LY KRF P+ V+ GL ++ K + T D++G+ E Sbjct: 2 SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKE 130
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.967e-12 Identity = 44/144 (30.56%), Postives = 72/144 (50.00%), Query Frame = 2 Query: 59 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERVGYSSQGSGSTLIMPFLDNQ 490 G T V I D V A + R S G I + KI K+ + +G AD ++L K L A +Y+ ++++++S A L +N L+ RF+P+ +LGG+D G +Y+ D G + S GSGS + L+++ Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENG-AKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDR 151 HSP 2 Score: 23.483 bits (49), Expect = 1.967e-12 Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 586 SATERDIYTGNKLEIGVLTK 645 SA ERD Y+GN + + +T+ Sbjct: 171 SAMERDTYSGNGILVATVTE 190
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 3.308e-12 Identity = 40/143 (27.97%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 59 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSY-ERVGYSSQGSGSTLIMPFLD 484 G T V + D + A D R S G + ++ K+ K+ D M +G D +A+ +LL A +Y+ + + + A LLSN L+ R FP+ + ++GG D +++ D +G E +++ GSGS + L+ Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLE 148 HSP 2 Score: 27.335 bits (59), Expect = 3.308e-12 Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 1 Query: 586 SATERDIYTGNKLEIGVLTKMG 651 SA ERD ++GN + + V+TK G Sbjct: 170 SAMERDTFSGNGISLAVITKDG 191
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSB3_CAEEL (Proteasome subunit beta type-3 OS=Caenorhabditis elegans GN=pbs-3 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12 Identity = 37/144 (25.69%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 59 GGTCVAIAGADYCVTAADTRMSTGYSILSRDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYERV-GYSSQGSGSTLIMPFLDN 487 GGT VA+AG + A+D R+ + ++ D K+ K+ DK + +GFQ+D + + + + R +Y+ + N+ + + +++SN Y RF Y++ ++ GLD+ K + D +G + + G+G ++ +N Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCEN 151
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Match: PSB3_GIALA (Proteasome subunit beta type-3 OS=Giardia lamblia GN=PRSBETA3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.320e-12 Identity = 40/170 (23.53%), Postives = 81/170 (47.65%), Query Frame = 2 Query: 47 YDNNGGTCVAIAGADYCVTAADTRMSTGYSILS-RDYSKIIKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTYDAVGSYER-VGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSE 550 ++ NG + I G D AAD R+ Y L+ + +I +L+ C++ +G Q DV + + + +Y Q ++++ A +++S+ LY RF PY+ ++ G + +GK + D +G + + G+ S ++ + +K ++D + PL E Sbjct: 5 WEYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDM-----SEDEILPLME 169 HSP 2 Score: 20.7866 bits (42), Expect = 3.320e-12 Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 1 Query: 586 SATERDIYTGNKLEIGVLTKMG 651 SAT RD Y+G + VL + G Sbjct: 174 SATNRDAYSGWGAHVVVLRRDG 195 The following BLAST results are available for this feature:
BLAST of BQ623381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623381 ID=BQ623381; Name=BQ623381; organism=Citrus sinensis; type=EST; length=689bpback to top |