BQ623382

Overview
NameBQ623382
Unique NameBQ623382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6338 contig Csv1_Contig6338:87..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            +++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  225 NSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            +++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  225 NSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.787e-16
Identity = 41/133 (30.83%), Postives = 75/133 (56.39%), Query Frame = 1 
Query:   13 GDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 411
            GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  275 GDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 1 
Query:    4 TVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            ++  DIVFV++ K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  226 SIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 43/113 (38.05%), Postives = 64/113 (56.64%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            +++  DIVFV++ KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  225 NSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            D +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  236 DNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            D +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  236 DNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            D +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  236 DNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  229 NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339
[Close]
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:    1 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 339
            + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  229 NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339
The following BLAST results are available for this feature:
BLAST of BQ623382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
DNJB4_PONAB5.196e-1638.05DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN5.196e-1638.05DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJA1_DICDI6.787e-1630.83DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB4_BOVIN1.975e-1538.39DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB4_MOUSE2.579e-1538.05DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB5_MOUSE3.368e-1538.94DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN3.368e-1538.94DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN3.368e-1538.94DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB1_MOUSE1.280e-1438.94DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNJB1_HUMAN1.280e-1438.94DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00473 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623382 ID=BQ623382; Name=BQ623382; organism=Citrus sinensis; type=EST; length=615bp
GACACTGTCACAGGTGACATTGTATTTGTTCTACAACAGAAAGAGCACCC
GAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAGCACACCCTGTCAC
TGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAACTCATTTGGATGGC
CGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCA
ATTCAAGGCCATAAATGATGAAGGAATGCCTATGTATCAGAGGCCATTTA
TGAGGGGCAAACTGTACATTCATTTCAGTGTTGACTTCCCTGAGTCACTG
AGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTACCTCCAAGGACCTC
AGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAAGAAACAACCCTGC
ATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAG
GAGGCATACGATGAAGATGACGATATGCAAGGTGGTGCCCAGAGAGTGCA
GTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTGGCCTGATTTAGTA
TTTTCATTGGTTAGGGAAAAAAGATTCTCAACATATTTATTTTTCTGTTA
TAGGCTTTAAAGGTT
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