BQ623387

Overview
NameBQ623387
Unique NameBQ623387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.679e-18
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  188 SASVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            S ++G + C     RLY +      D  L+  +   +  +CP +  D         D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  199 SHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFL---DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          

HSP 2 Score: 35.8094 bits (81), Expect = 9.679e-18
Identity = 18/56 (32.14%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D
Sbjct:  134 LAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLD 189          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.637e-17
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G +HC +  +RL     +  VDP ++P +   ++  C D  P+P AV  V  D  +    DN+YY+N++  KGL   D  L  D  ++  V + A + + F+  FS A+  L       G +GEIR+ C+  N
Sbjct:  200 TIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD--PNPDAV--VDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          

HSP 2 Score: 37.7354 bits (86), Expect = 1.637e-17
Identity = 20/55 (36.36%), Postives = 33/55 (60.00%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+
Sbjct:  133 LAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGL 187          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.126e-17
Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  188 SASVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK-RTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLHD 595
            S ++G + C+    RLY        D  LN D+   +   CP +  D         D  TP   DN YY+N+++ +GL+  D  L T    T   VK  A+++  FF++F++++  +   +PLTGT GEIR++C   N  HD
Sbjct:  207 SHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNL---DYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN--HD 343          

HSP 2 Score: 32.7278 bits (73), Expect = 2.126e-17
Identity = 17/56 (30.36%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L  RD +V  GGP   +  GRRD R++      + +P    ++  +L  F   G+D
Sbjct:  142 LVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLD 197          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.765e-17
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  188 SASVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            S ++G + C     RLY +      D  L   +  ++  +CP +  D    +   N  G     DN+Y++N+++N GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  202 SHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          

HSP 2 Score: 33.113 bits (74), Expect = 2.765e-17
Identity = 17/56 (30.36%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD  V  GGP   +  GRRD   +        +P  N++ + ++ RF   G+D
Sbjct:  137 LAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLD 192          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17
Identity = 48/130 (36.92%), Postives = 66/130 (50.77%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G  HC     RLYP  DP +N      +   CP A      V    ND  +P V DN YY ++++ +GL   D  L  DKRTR  V+  A  Q  FF  F+ A+  + + + LTGT+GEIR  C+  N
Sbjct:  214 TIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQV----NDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARN 339          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.072e-17
Identity = 46/136 (33.82%), Postives = 68/136 (50.00%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR---TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            G++ C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F +AI  +S  +PLTG +GEIR  C + N
Sbjct:  195 GKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVN 327          

HSP 2 Score: 35.039 bits (79), Expect = 6.072e-17
Identity = 14/56 (25.00%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++  + +RF  +G+D
Sbjct:  125 IAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLD 180          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 6.075e-17
Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRL--YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQ--YVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 574
            ++G THC  ++ R          ++P     +   CP+  P  +A +  +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  207 TIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          

HSP 2 Score: 30.8018 bits (68), Expect = 6.075e-17
Identity = 17/56 (30.36%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAE-ILEQYLPDHNDSMSVVLERFAAIGI 167
            L+ RD V   GGP I +  GR+D   + ++ + +  LP     +   L  FA  G+
Sbjct:  139 LAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGM 194          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.082e-17
Identity = 43/135 (31.85%), Postives = 62/135 (45.93%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G  HC K   R+Y       +DP LN  +   +   CP  +    A+     D  +P   DN Y++N+    GL   D  L +D+R+R  V   A S+  F + F  AIT L      TG  GEIR+ C+  N
Sbjct:  192 TIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINM---DPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          

HSP 2 Score: 39.2762 bits (90), Expect = 6.082e-17
Identity = 21/55 (38.18%), Postives = 30/55 (54.55%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+
Sbjct:  125 LATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGL 179          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.027e-16
Identity = 42/138 (30.43%), Postives = 73/138 (52.90%), Query Frame = 2
Query:  188 SASVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            S ++G + C     RLY +      D  L      ++  +CP +  D         D  +    DN+Y++N+++NKGL+  D  L ++++++R  VKK A+ Q  FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  196 SHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVL---DIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 330          

HSP 2 Score: 36.1946 bits (82), Expect = 1.027e-16
Identity = 18/56 (32.14%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D
Sbjct:  131 LAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLD 186          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.028e-16
Identity = 37/130 (28.46%), Postives = 60/130 (46.15%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L     T   V+  + +   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  198 TIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          

HSP 2 Score: 45.0542 bits (105), Expect = 1.028e-16
Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+
Sbjct:  131 IAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGL 185          
The following BLAST results are available for this feature:
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PER72_ARATH9.679e-1830.43Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER55_ARATH1.637e-1731.11Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER36_ARATH2.126e-1732.39Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER15_ARATH2.765e-1730.43Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER12_ARATH5.485e-1736.92Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER38_ARATH6.072e-1733.82Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER29_ARATH6.075e-1732.82Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER16_ARATH6.082e-1731.85Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER49_ARATH1.027e-1630.43Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER52_ARATH1.028e-1628.46Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00478 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00478 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623387 ID=BQ623387; Name=BQ623387; organism=Citrus sinensis; type=EST; length=668bp
TCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCT
CTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGA
GCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGT
TTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACC
TTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTT
CAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCTTGGTTCTTC
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