BQ623387

Overview
NameBQ623387
Unique NameBQ623387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:446..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 62.3882 bits (150), Expect = 6.459e-16
Identity = 38/130 (29.23%), Postives = 62/130 (47.69%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G++ CV    R+Y E +  +N          CP A     A      D  +    DN+Y++N++  +GL+  D  L     T   V+  + S   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  170 TIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRAAGSGDA-NLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          

HSP 2 Score: 41.2022 bits (95), Expect = 6.459e-16
Identity = 19/55 (34.55%), Postives = 32/55 (58.18%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+
Sbjct:  103 IAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGL 157          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 8.372e-16
Identity = 41/137 (29.93%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEV-----DPALNPDHVPHML-HKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKK-MAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G +HC    +RLY        DPAL+ ++  ++   KCP ++ D K +  V  D G+    D +YY+ +L  +GL   D  L T+  T   + + +  S   FF EF++++  +   N  TG+ G +R+ C++AN
Sbjct:  192 TIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP-SLNDNKTI--VEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          

HSP 2 Score: 38.1206 bits (87), Expect = 8.372e-16
Identity = 22/56 (39.29%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D
Sbjct:  125 LASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLD 180          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.088e-15
Identity = 51/145 (35.17%), Postives = 68/145 (46.90%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 595
            G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  182 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 321          

HSP 2 Score: 30.4166 bits (67), Expect = 1.088e-15
Identity = 15/58 (25.86%), Postives = 30/58 (51.72%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP 176
            ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P
Sbjct:  112 IAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRP 169          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.413e-15
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 2
Query:  188 SASVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            S S+GRTHC  +V RLY      +  P +N   +  M  +CP        DP  + Y+  D G+     +++Y  IL NK ++ VD QL  +  T+   K+ ++  + F K F+ +++ +   N LT T+GEIRK C   N
Sbjct:  197 SHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDP--LVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          

HSP 2 Score: 31.5722 bits (70), Expect = 1.413e-15
Identity = 19/56 (33.93%), Postives = 29/56 (51.79%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++
Sbjct:  134 LATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN 187          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.384e-15
Identity = 51/145 (35.17%), Postives = 68/145 (46.90%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 595
            G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  201 GKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 340          

HSP 2 Score: 29.6462 bits (65), Expect = 2.384e-15
Identity = 15/58 (25.86%), Postives = 29/58 (50.00%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP 176
            ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P
Sbjct:  131 IAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRP 188          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.389e-15
Identity = 44/139 (31.65%), Postives = 65/139 (46.76%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRN-DRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G + C  +  RLY      + DP++NP +V  +  KCP     P   +   N D G+ +  D +Y++ +   KGL   D  L  D  T+ YV+  A     F    K+FS ++  L     LTG  GEIRK C   N
Sbjct:  192 TIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP-----PTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          

HSP 2 Score: 39.2762 bits (90), Expect = 2.389e-15
Identity = 21/57 (36.84%), Postives = 30/57 (52.63%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDA 173
            L  RD V  +GGP+ P+  GRRDGR S+       LP     +  + + FA  G++A
Sbjct:  125 LVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNA 181          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.096e-15
Identity = 44/135 (32.59%), Postives = 63/135 (46.67%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLA--TDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            GR  CV   +RL+        DP LN   +  +   CP    +         D  TP   DNNY+ N+  N GL+  D +L   T   T P V   A +Q  FF+ F +++  +   +PLTG+ GEIR+ C + N
Sbjct:  203 GRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQ---NGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVN 334          

HSP 2 Score: 29.6462 bits (65), Expect = 3.096e-15
Identity = 15/55 (27.27%), Postives = 25/55 (45.45%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            L+    V   GGP   +  GRRDG  +        LP   + ++ +  +F A+G+
Sbjct:  134 LASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGL 188          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.099e-15
Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITLLSENNPLTGTK--GEIRKVCNLAN 583
            ++G+  C  +  RLY        DP+++  +  ++  +C        A + V  D  TP V DN YY N+  + G++  D +L  D RT P VK  A +S   F ++F+ ++  L     LTG    GEIRKVC+ +N
Sbjct:  214 TIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCR------WASETVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSN 345          

HSP 2 Score: 36.965 bits (84), Expect = 3.099e-15
Identity = 20/55 (36.36%), Postives = 31/55 (56.36%), Query Frame = 3
Query:    6 SGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            + R   V LGGPY P   GRRD + S A  +E+ +P     ++ +LE F + G++
Sbjct:  149 ASRAATVQLGGPYWPNVYGRRDSKHSYARDVEK-VPSGRRDVTALLETFQSYGLN 202          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 3.106e-15
Identity = 38/134 (28.36%), Postives = 64/134 (47.76%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPE----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G   C  + +R++       DP ++   VP +   CP        V     D G+    D +Y+ N+  N+G++  DH L T   TR  V++    +  F  +F+R++  +S     TGT GEIR+VC+  N
Sbjct:  189 TIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDL---DTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPATRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          

HSP 2 Score: 35.039 bits (79), Expect = 3.106e-15
Identity = 20/56 (35.71%), Postives = 31/56 (55.36%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD V    G    + TGRRDGR S A  +   LP  +DS+++   +F+A  ++
Sbjct:  122 LAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLN 176          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.027e-15
Identity = 44/135 (32.59%), Postives = 63/135 (46.67%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            G+  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP   D  YY N+L+ KGL+  D  L +     T P V + + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  202 GKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          

HSP 2 Score: 31.9574 bits (71), Expect = 4.027e-15
Identity = 15/58 (25.86%), Postives = 31/58 (53.45%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP 176
            ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++ P
Sbjct:  132 IASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRP 189          
The following BLAST results are available for this feature:
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PERP7_BRARA6.459e-1629.23Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER3_ARATH8.372e-1629.93Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER1C_ARMRU1.088e-1535.17Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER26_ARATH1.413e-1532.62Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER1B_ARMRU2.384e-1535.17Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1_ARATH2.389e-1531.65Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER54_ARATH3.096e-1532.59Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER7_ARATH3.099e-1531.88Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER62_ARATH3.106e-1528.36Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER23_ARATH4.027e-1532.59Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00478 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00478 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623387 ID=BQ623387; Name=BQ623387; organism=Citrus sinensis; type=EST; length=668bp
TCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCT
CTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGA
GCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGT
TTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACC
TTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTT
CAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCTTGGTTCTTC
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