BQ623387

Overview
NameBQ623387
Unique NameBQ623387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:446..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.201e-14
Identity = 44/135 (32.59%), Postives = 64/135 (47.41%), Query Frame = 2 
Query:  200 GRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            GR  C+ +  RLY        DP LNP ++  +   CP    +      V  D  TP   DN +Y N+ + KGL+  D +L +     T P V   + +   FF  F+ A+  +    PLTGT+GEIR+ C + N
Sbjct:  173 GRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPR---NGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVN 304

HSP 2 Score: 28.1054 bits (61), Expect = 7.201e-14
Identity = 14/58 (24.14%), Postives = 31/58 (53.45%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP 176
            ++ +  V+  GGP   +  GRRD  ++  ++    LP    +++ + + FA +G++ P
Sbjct:  103 IASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRP 160
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 9.319e-14
Identity = 43/135 (31.85%), Postives = 61/135 (45.19%), Query Frame = 2 
Query:  200 GRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            GR  C  +  RLY        DP L+P ++  +   CP    +      V  D  TP   D  YY N+ + KGL+  D +L +     T P V   + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  202 GRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQ---NGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVN 333

HSP 2 Score: 32.7278 bits (73), Expect = 9.319e-14
Identity = 15/58 (25.86%), Postives = 33/58 (56.90%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP 176
            ++ +  V+  GGP+ P+  GRRD  ++  ++    LP    +++ + + FA +G++ P
Sbjct:  132 IASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRP 189
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.578e-13
Identity = 38/130 (29.23%), Postives = 58/130 (44.62%), Query Frame = 2 
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C     R+Y   D  +N      +   CP +  +         D  TP   DN YY N+L  KGL+  D  L  ++ T   V+  A +   F   F+ A+  +    PLTGT+G+IR  C+  N
Sbjct:  186 TIGKAQCSNFRTRIYGG-DTNINTAFATSLKANCPQSGGNTNLANL---DTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCSKVN 311

HSP 2 Score: 35.039 bits (79), Expect = 1.578e-13
Identity = 18/44 (40.91%), Postives = 24/44 (54.55%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMS 134
            ++ RD VVALGGP   +  GRRD   + A +    LP  + S S
Sbjct:  119 VAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRS 162
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.046e-13
Identity = 41/139 (29.50%), Postives = 68/139 (48.92%), Query Frame = 2 
Query:  194 SVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCP-DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G   C+    R +        DP + P  VP +  +CP +  P  + V     D G+    D +Y  N+ + +GL+  D  L T+  TRP V+++   +  F     EF+R++T +S+    TG  GEIR+VC+  N
Sbjct:  196 TIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVL----DTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN 330

HSP 2 Score: 35.8094 bits (81), Expect = 2.046e-13
Identity = 23/51 (45.10%), Postives = 28/51 (54.90%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFA 155
            L+ RD V   GGP+ P+  GR DGR S A      LP   DS++V   RFA
Sbjct:  131 LAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFA 179
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.652e-13
Identity = 49/145 (33.79%), Postives = 66/145 (45.52%), Query Frame = 2 
Query:  200 GRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 595
            G+  C  ++ RLY        DP LN  ++  +   CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    P TGT+G+IR  C + N    LHD
Sbjct:  203 GKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDF---DLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATD--TIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSLLHD 342

HSP 2 Score: 28.4906 bits (62), Expect = 2.652e-13
Identity = 15/58 (25.86%), Postives = 27/58 (46.55%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAP 176
            ++ +  V   GGP   +  GRRD  ++  E+    LP    ++  +   F  +G+D P
Sbjct:  133 IAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRP 190
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.656e-13
Identity = 43/135 (31.85%), Postives = 61/135 (45.19%), Query Frame = 2 
Query:  200 GRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L   T   T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C   N
Sbjct:  202 GRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333

HSP 2 Score: 28.4906 bits (62), Expect = 2.656e-13
Identity = 15/56 (26.79%), Postives = 27/56 (48.21%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+    V   GGP   +  GRRD   +        +P   +S+S +  +F+A+G++
Sbjct:  133 LASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLN 188
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.658e-13
Identity = 39/136 (28.68%), Postives = 65/136 (47.79%), Query Frame = 2 
Query:  194 SVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAK-SQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G +HC    +RL+      + DP+L+ ++  ++  +   +I D      V  D G+    D +YYR +L  +GL   D  L  +      VK+ A  S+  FF EFS ++  +      TG+ GEIR+ C   N
Sbjct:  193 TIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTK--VEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326

HSP 2 Score: 37.7354 bits (86), Expect = 2.658e-13
Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD +VA+GGP   + TGRRDGR S        +P    + + ++  F   G+D
Sbjct:  126 LATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLD 181
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 3.453e-13
Identity = 40/140 (28.57%), Postives = 62/140 (44.29%), Query Frame = 2 
Query:  194 SVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF-----KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G T C  +  RLY      + DP +NP  +P +  +CP    +      +  DR +  + D    +NI D   ++  D  L  D  TR  V       + FF      +F +AI  + +    TG KGEIR+VC+  N
Sbjct:  190 TIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQ---NGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326

HSP 2 Score: 39.2762 bits (90), Expect = 3.453e-13
Identity = 19/57 (33.33%), Postives = 33/57 (57.89%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDA 173
            L+ RD +    GP   + TGRRDGR S   + +  +P+ +DS+ ++  +F   G++A
Sbjct:  124 LAARDAISLANGPAYEVPTGRRDGRVSNMSLAKD-MPEVSDSIEILKAKFMQKGLNA 179
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.455e-13
Identity = 36/128 (28.12%), Postives = 60/128 (46.88%), Query Frame = 2 
Query:  188 SASVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 571
            S ++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   +TGT G +R +C
Sbjct:  194 SHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317

HSP 2 Score: 36.1946 bits (82), Expect = 3.455e-13
Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++
Sbjct:  129 VAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLN 184
[Close]
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.455e-13
Identity = 36/128 (28.12%), Postives = 60/128 (46.88%), Query Frame = 2 
Query:  188 SASVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 571
            S ++G+  C++   R+Y      + P+    +   CP   P          D  TP   DNNYYRN++ ++GL++ D  L     T   V +   +   F  +F+ A+  +SE   +TGT G +R +C
Sbjct:  194 SHTLGQARCIRFRGRIYNST-LRIEPNFNRSLSQACP---PTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317

HSP 2 Score: 36.1946 bits (82), Expect = 3.455e-13
Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 3 
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            ++ RD  VA+GGP   ++ GRRD   S A      LP  N  +S ++  FA  G++
Sbjct:  129 VAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLN 184
The following BLAST results are available for this feature:
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PERE5_ARMRU7.201e-1432.59Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER3_ARMRU9.319e-1431.85Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER1_WHEAT1.578e-1329.23Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER70_ARATH2.046e-1329.50Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER34_ARATH2.652e-1333.79Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER53_ARATH2.656e-1331.85Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER39_ARATH2.658e-1328.68Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER43_ARATH3.453e-1328.57Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER2_ZINEL3.455e-1328.13Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL3.455e-1328.13Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00478 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00478 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623387 ID=BQ623387; Name=BQ623387; organism=Citrus sinensis; type=EST; length=668bp
TCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCT
CTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGA
GCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGT
TTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACC
TTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTT
CAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCTTGGTTCTTC
back to top