BQ623387

Overview
NameBQ623387
Unique NameBQ623387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:446..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.739e-11
Identity = 40/135 (29.63%), Postives = 59/135 (43.70%), Query Frame = 2
Query:  200 GRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            GR  C     RL+        DP LN  ++  +   CP              D  TP   DNNY+ N+  N+GL+  D +L   +   T   V   + +Q  FF+ F +++  +   +PLTG+ GEIR  C   N
Sbjct:  196 GRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQG---GSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          

HSP 2 Score: 26.9498 bits (58), Expect = 1.739e-11
Identity = 14/56 (25.00%), Postives = 27/56 (48.21%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+    V   GGP   +  GRRD R +        LP   ++++ + ++F  +G++
Sbjct:  127 LASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLN 182          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 1.741e-11
Identity = 38/130 (29.23%), Postives = 58/130 (44.62%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL     T   V   + +   F  +F  A+  +   +PLTGT G+IR  C   N
Sbjct:  192 TIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          

HSP 2 Score: 27.335 bits (59), Expect = 1.741e-11
Identity = 17/54 (31.48%), Postives = 26/54 (48.15%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIG 164
            ++ RD VVALGG    +  GRRD   +        LP    ++S ++  F+  G
Sbjct:  125 VAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKG 178          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.932e-11
Identity = 32/112 (28.57%), Postives = 60/112 (53.57%), Query Frame = 2
Query:  248 DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            DP+++P     + + C  A+P   A    ++   TP+  DN ++  I + KG++++D  +A+D  T   V + A + + F ++F+ A+  +   + LTG+ GEIR  C   N
Sbjct:  213 DPSMDPTLAGRLRNTC--AVPGGFAA-LDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          

HSP 2 Score: 33.113 bits (74), Expect = 2.932e-11
Identity = 21/56 (37.50%), Postives = 28/56 (50.00%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 170
            L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++
Sbjct:  123 LATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN 178          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.934e-11
Identity = 35/130 (26.92%), Postives = 55/130 (42.31%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++G+  C     R+Y   D  +N  +   +   CP  +           D  T    DN YY N++  KGL+  D  L  +  T   V+  A +   F   F+ A+  +    P TGT+G+IR  C+  N
Sbjct:  187 TIGQAQCSTFRARIYGG-DTNINAAYAASLRANCPQTVGSGDG-SLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          

HSP 2 Score: 31.9574 bits (71), Expect = 2.934e-11
Identity = 19/54 (35.19%), Postives = 25/54 (46.30%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIG 164
            ++ RD VVALGGP   +  GRRD   +        LP  N S + +   F   G
Sbjct:  119 VAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKG 172          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.809e-11
Identity = 34/130 (26.15%), Postives = 63/130 (48.46%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            ++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + + +PLTG+ G+IR+ C   N
Sbjct:  190 TIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          

HSP 2 Score: 32.3426 bits (72), Expect = 3.809e-11
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGI 167
            ++ RD V+ LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+
Sbjct:  122 ITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGL 177          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.386e-11
Identity = 39/138 (28.26%), Postives = 62/138 (44.93%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPE--------VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 583
            +VGR+ C     R++          VD  L+P +   +   CP        +     D GTP VLDNNYY+ +    GL   D+QL  + +    V   A ++  + ++F+ A+  +      TGT GE+R  C + N
Sbjct:  203 TVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAM-DPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          

HSP 2 Score: 23.8682 bits (50), Expect = 6.386e-11
Identity = 11/28 (39.29%), Postives = 14/28 (50.00%), Query Frame = 3
Query:    6 SGRDGVVALGGPYIPLKTGRRDGRKSRA 89
            + RD +   G     +  GRRDGR S A
Sbjct:  138 AARDSISLTGSVSYQVPAGRRDGRVSNA 165          
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 8.312e-11
Identity = 37/139 (26.62%), Postives = 66/139 (47.48%), Query Frame = 2
Query:  194 SVGRTHCVKLVHRLYPE--VDPALNP---DHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK---RTRPYVKKMAKSQDYFFKEFSRAITLLSE-NNPLTGTKGEIRKVCNLAN 583
            ++G+  C     R+Y +  V  ALNP    ++  +   CP +  +  +      D  TP + DN+ Y  +L  +GL+  D ++ T     +TR  V K A+    FF++FS+++  +    N  +   GE+R+ C   N
Sbjct:  198 TIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDS-NVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          

HSP 2 Score: 36.1946 bits (82), Expect = 8.312e-11
Identity = 14/55 (25.45%), Postives = 29/55 (52.73%), Query Frame = 3
Query:    3 LSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGI 167
            +  RD  + +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+
Sbjct:  131 IGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGL 185          
The following BLAST results are available for this feature:
BLAST of BQ623387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PER15_IPOBA1.739e-1129.63Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER1_ARAHY1.741e-1129.23Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER28_ARATH2.932e-1128.57Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER1_HORVU2.934e-1126.92Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER67_ARATH3.809e-1126.15Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER1_MAIZE6.386e-1128.26Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER11_ARATH8.312e-1126.62Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00478 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00478 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623387 ID=BQ623387; Name=BQ623387; organism=Citrus sinensis; type=EST; length=668bp
TCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCT
CTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGA
GCAGTATCTCCCAGATCACAACGACAGCATGTCTGTTGTTCTTGAGAGGT
TTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGTGTTG
GCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGAC
CCTGCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGA
TGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCA
CACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAG
GGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACC
TTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTT
CAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAG
GGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTC
CTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAATT
TTTCTTCCTTGGTTCTTC
back to top