BQ623388

Overview
NameBQ623388
Unique NameBQ623388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 1 
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVD-VRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFEL-ATPLDQPVDMSESPGLTIPKATPLKVLLSPR 303
            DP  W NP  F PERF+ G G  AD+  V G   +++PFG GRR CPG + A   +HL +AR++  FE  A P ++ +D +     T+     L+  + PR
Sbjct:  409 DPKNWLNPEKFDPERFISG-GEEADITGVTG--VKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPEKKMDFTGKWEFTVVMKESLRATIKPR 506
[Close]
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 1 
Query:    4 RDPSVW-ENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVD---MSESPGLTIPKATPLKVLLS 297
            R+ + W  +   F+PER L      + VD RGQ FELIPFGSGRR CP  S A+ +  + LA L+H F+    ++   D   ++ES G+ I +  PL  + S
Sbjct:  390 REAATWGPDVEEFRPERHLD-----SSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHRMFPLYAIAS 486
The following BLAST results are available for this feature:
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C77A3_SOYBN7.813e-1138.61Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
C71AQ_ARATH7.813e-1139.22Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00479 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00479 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623388 ID=BQ623388; Name=BQ623388; organism=Citrus sinensis; type=EST; length=520bp
CAAAGGGATCCAAGTGTTTGGGAAAATCCATCGGCCTTCCAACCAGAGAG
ATTTCTCCCAGGCCATGGCGCCCATGCAGATGTTGATGTTAGGGGCCAAC
AATTTGAACTCATTCCTTTTGGCTCTGGCCGACGTTCTTGCCCAGGTGCA
TCATCTGCTCTCCAGGTCCTTCACCTCACGCTTGCTCGACTCCTTCATTC
ATTTGAACTAGCAACCCCATTGGATCAGCCTGTTGACATGTCAGAGTCTC
CTGGCTTAACCATACCGAAGGCCACCCCATTGAAGGTTCTCCTTTCTCCT
CGCCTCCTCCCTGCCAACCCCTATGGCTTTTGAGTTTGAGCAATTATTAA
ATCCAGCAAGCAAAGCTCGAAGTGCTTAATAATTATTAGCTTATTGTTTA
CTGAATAAAGCGAGCTGTAGTGTTGGTTAAATTACTTTCTTAATGTTATG
CACTTACTACAAATTACTGCTGCTGTTGTGGGCGATCTTTGCTTGCATGA
ATTAAGTTTTTTCTTTCAAA
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