BQ623388

Overview
NameBQ623388
Unique NameBQ623388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9343 contig Csv1_Contig9343:189..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.507e-17
Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLD---QPVDMSESPGLTIPKATPLKVL 291
            R+P+VW++P AF PERF+        +D +G  FE +PFGSGRR CPG    + ++HLTL  LL+ F+   P     + VD+ ES GL  PK  PL+++
Sbjct:  396 RNPNVWKDPEAFIPERFMDNQ-----IDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLI 489          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.275e-17
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLD-QPVDMSESPGLTIPKATPL 282
            RDP+ W+ P  F+PERFL     ++ VD +G  FELIPFG+GRR CPG +  +  L  TLA L+  F+   P + + +DMSE PG+ I +  PL
Sbjct:  407 RDPTSWDEPEKFRPERFL-----NSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSERPGVAIRRVIPL 495          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQPVDMSESPGLTIPKATPL 282
            DP++WE+P  F+PERF+   G   +VDVRG    L PFG+GRR CPG +  L  ++L +A+LLH FE     + PVD+SE   L+   A PL
Sbjct:  448 DPNIWESPYEFRPERFVVFEGGE-EVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPL 538          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLD-QPVDMSESPGLTIPKATPLKVL 291
            RDP  W+NP  F PERF+        VD +G  FE +PFGSGRR CPG +SA+  + LTL  LL+ F+   P + + ++M ES  +TI K  PL++L
Sbjct:  405 RDPKYWKNPEEFNPERFID-----CPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLELL 496          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLD---QPVDMSESPGLTIPKATPLKVLLSP 300
            DP  WENP+ F PERFL      + +D +GQ FE++PFG GRR CPG + A+ V+ L LA LL  F+   PL    Q +DM E+ G+TI K   L +  +P
Sbjct:  401 DPCCWENPNEFLPERFLV-----SPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHKKAHLWLKATP 496          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 7.295e-17
Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATP-LDQPVDMSESPGLTIPKATPLKVLLSPR 303
            D  VW +P AF PERF+P  G  ADVDVRG    L PFG+GRR CPG +  L  + L +ARL+H+F+   P    PV + E   L++   TPL    +PR
Sbjct:  452 DGEVWADPEAFAPERFIPSEGG-ADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPLAAAATPR 550          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.123e-16
Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATP---LDQPVDMSESPGLTIPKATPLKVL 291
            RDP  W NP  F PERF     A+  ++ +GQ +EL+PFG+GRRSCPG +  + +L L L  +L+ F+ + P     + +DM E   LTI K  PL+++
Sbjct:  403 RDPKCWTNPEEFNPERF-----ANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELI 496          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16
Identity = 47/100 (47.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:    7 DPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLD-QPVDMSESPGLTIPKATPLKVLLSPR 303
            D +VW +P AF PERFLP  G  ADVDVRG    L PFG+GRR CPG +  L  + L +ARL+H+F+ A P     V + E   L++   TPL     PR
Sbjct:  447 DAAVWADPDAFAPERFLPSEGG-ADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIPR 545          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16
Identity = 43/97 (44.33%), Postives = 58/97 (59.79%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATP-LDQPVDMSESPGLTIPKATPLKVL 291
            RDP  W+NP  F PERF+        VD +G  FEL+PFGSGRR CPG + A+  + L L  LL+ F+   P   + +DM E+  LT+ K  PL++L
Sbjct:  406 RDPESWKNPEEFNPERFID-----CPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELL 497          
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16
Identity = 45/104 (43.27%), Postives = 64/104 (61.54%), Query Frame = 1
Query:    4 RDPSVWENPSAFQPERFLPGHGAHADVDVRGQQFELIPFGSGRRSCPGASSALQVLHLTLARLLHSFELATPLDQP---VDMSESPGLTIPKATPLKVLLSPRL 306
            RDP  W++P  FQPERFL      +D++  G+QF+ IPFGSGRR CPG   A++++ L LA L+H+F    P   P   +DM E   L++  A PL+V+   R+
Sbjct:  389 RDPKDWKDPLKFQPERFLD-----SDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIPKVRI 487          
The following BLAST results are available for this feature:
BLAST of BQ623388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71BB_ARATH2.507e-1743.43Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71A8_MENPI3.275e-1745.74Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C78A4_PINRA5.586e-1746.74Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BP_ARATH5.586e-1745.36Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN5.586e-1745.54Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C78AB_ORYSJ7.295e-1746.00Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C71B8_ARATH2.123e-1641.41Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C78A1_MAIZE3.621e-1647.00Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C71B4_ARATH3.621e-1644.33Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C80A1_BERST4.729e-1643.27Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00479 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00479 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623388 ID=BQ623388; Name=BQ623388; organism=Citrus sinensis; type=EST; length=520bp
CAAAGGGATCCAAGTGTTTGGGAAAATCCATCGGCCTTCCAACCAGAGAG
ATTTCTCCCAGGCCATGGCGCCCATGCAGATGTTGATGTTAGGGGCCAAC
AATTTGAACTCATTCCTTTTGGCTCTGGCCGACGTTCTTGCCCAGGTGCA
TCATCTGCTCTCCAGGTCCTTCACCTCACGCTTGCTCGACTCCTTCATTC
ATTTGAACTAGCAACCCCATTGGATCAGCCTGTTGACATGTCAGAGTCTC
CTGGCTTAACCATACCGAAGGCCACCCCATTGAAGGTTCTCCTTTCTCCT
CGCCTCCTCCCTGCCAACCCCTATGGCTTTTGAGTTTGAGCAATTATTAA
ATCCAGCAAGCAAAGCTCGAAGTGCTTAATAATTATTAGCTTATTGTTTA
CTGAATAAAGCGAGCTGTAGTGTTGGTTAAATTACTTTCTTAATGTTATG
CACTTACTACAAATTACTGCTGCTGTTGTGGGCGATCTTTGCTTGCATGA
ATTAAGTTTTTTCTTTCAAA
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