BQ623389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 5.320e-55 Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G +GE D LYPGG FDPLGLA DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW +AT FVPG Sbjct: 130 VWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNFVPG 266
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 6.948e-55 Identity = 109/138 (78.99%), Postives = 118/138 (85.51%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIF EGGLDYLGNP+LVHAQSILA+ QVVLMG VEG+R+ G P +GE D LYPGG FDPLGLADDP FAEL+VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT FVPG Sbjct: 130 VWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP-LGEVIDPLYPGGS-FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 265
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.185e-54 Identity = 105/138 (76.09%), Postives = 118/138 (85.51%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAGAQIFSEGGLDYLG+P L+HAQSILA+ QV+LMG +EG+R+ G P +GE D +YPGG FDPLGLADDP FA++KVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW YAT FVPG Sbjct: 142 VWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGP-LGEVTDPIYPGGN-FDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.185e-54 Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIF+EGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G P +GE D +YPGG FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +P NNAW YAT F PG Sbjct: 129 VWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP-LGEVEDPIYPGGS-FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNFTPG 264
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.185e-54 Identity = 107/138 (77.54%), Postives = 117/138 (84.78%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G P +GE D +YPGG FDPLGLADDP AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YATK PG Sbjct: 120 VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVTDPIYPGGS-FDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPG 255
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.448e-54 Identity = 106/139 (76.26%), Postives = 119/139 (85.61%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPGS 415 VWFKAGAQIFSEGGLDYLGNP+LVHAQ+I+A QV+LMGL+EG+R+NG P GEG D LYPG + FDPLGLADDP TFAELKVKEIKNGRLA FSMFGFFVQAIVTGKGP++NL DHL NP NNA+ +ATKF P + Sbjct: 117 VWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPA-GEGLDPLYPG-ESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTPSA 253
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 4.504e-54 Identity = 107/137 (78.10%), Postives = 115/137 (83.94%), Query Frame = 2 Query: 5 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 WFKAG+QIFSEGGLDYLGN +L+HAQSILA+ QV+LMG VEG+RI G P +GE D +YPGG FDPL LADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL PV NNAW YAT FVPG Sbjct: 110 WFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVTDPIYPGGS-FDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPG 244
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 5.882e-54 Identity = 107/138 (77.54%), Postives = 116/138 (84.06%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLADDP F ELKVKE+K GRLAM SMFGFFVQAIVTGKGPLENL DH+ +PV NNAW YAT FVPG Sbjct: 129 VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPG 264
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.310e-53 Identity = 108/138 (78.26%), Postives = 116/138 (84.06%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFK G+QIFSEGGL YLGNP+LVHAQSILA+ QVVLMG VEG+R+ G P +GE D LYPGG FDPLGLADD FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT FVPG Sbjct: 128 VWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGP-LGEVVDPLYPGGS-FDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 263
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.310e-53 Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+RI G P +GE D LYPGG FDPLGLA+ P FAELKVKE+KNGRLAMFSMFGFFV AIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 92 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 227 The following BLAST results are available for this feature:
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623389 ID=BQ623389; Name=BQ623389; organism=Citrus sinensis; type=EST; length=432bpback to top |