BQ623389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.711e-53 Identity = 106/138 (76.81%), Postives = 118/138 (85.51%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIFSEGGLDYLGNP+LVHAQSIL++ QV+LMG VEG+R+ G P +GE D LYPGG FDPLGLA+DP AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT FVPG Sbjct: 128 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGP-LGEIVDPLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 263
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 6.504e-53 Identity = 105/139 (75.54%), Postives = 118/139 (84.89%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPGS 415 VWFKAGAQIFSEGGLDYLG+P L+HAQ+I+A L QVVLMGL+EG+R+NG P GEG D LYPG + FDPLGLADDP TFAELKVKEIKNGRLAMFS FGFFVQAIVTGKGP++NL DHL +P NNA+ ATKF P + Sbjct: 120 VWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPA-GEGLDPLYPG-ESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTPSA 256
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 8.494e-53 Identity = 103/137 (75.18%), Postives = 116/137 (84.67%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVP 409 +WFKAGA IF +GGL+YLGNP+L+HAQ+I+A L QVVLMGLVEG+R+NG P GEG D LYPG + FDPLGLADDP TFAELKVKEIKNGRLAMF+ GFFVQAIVTGKGP+ENL DHL NP NNA+ YATKF P Sbjct: 138 IWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPA-GEGLDPLYPG-EAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.109e-52 Identity = 103/136 (75.74%), Postives = 113/136 (83.09%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVP 409 VW KAG+QIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G P + LYPGG FDPLGLA+DP FAELKVKE KNGRLAMFSMFGFF+QAIVTGKGPLENL DHL +PV NNAW YAT FVP Sbjct: 131 VWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGS-FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNFVP 265
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 3.228e-52 Identity = 105/137 (76.64%), Postives = 117/137 (85.40%), Query Frame = 2 Query: 5 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 WFKAG+QIFS+GGLDYLGNP+LVHAQS+LA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLA+ P FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE+L DH+ +PV NNAW+ AT FVPG Sbjct: 131 WFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGP-LGEIVDPLYPGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPG 265
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 7.950e-51 Identity = 104/138 (75.36%), Postives = 113/138 (81.88%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAG+QIFSEGGL + GNP+LVHAQSILA+ QVVLMG VEG+ + G +GE D LY GG FDPLGL DDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW YAT FVPG Sbjct: 128 VWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAG-GRLGEVVDPLYLGGS-FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNFVPG 263
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.693e-48 Identity = 97/139 (69.78%), Postives = 111/139 (79.86%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG--VGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 VWFKAGAQIF++GGL+YLGN +L+HAQSI+A L QVVLMGL E +R NG + + + LYPGG FDPLGLADDP TFAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHL +P N A+ ATKF PG Sbjct: 115 VWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.926e-45 Identity = 92/124 (74.19%), Postives = 100/124 (80.65%), Query Frame = 2 Query: 44 LDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 LDYLGNP+LVHAQSILA+ QV+LMG VEG+R+ G +GE D LYPGG FDPL DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT FVPG Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 123
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 5.518e-44 Identity = 98/139 (70.50%), Postives = 108/139 (77.70%), Query Frame = 2 Query: 2 VWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPGS 415 VWFKAGAQIFSEGGLDYLGNP+LVHAQSILA+ +V+LMG VEG+RI P +GE D LYPG FD LGLA+D FAELKVKE+KNGRLAMFSMFGFFVQAIV+ K LENL DHL V NNA T FVPG+ Sbjct: 133 VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGP-LGEVTDPLYPGS--FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPGN 268
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.359e-42 Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = 2 Query: 65 NLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKFVPG 412 +LVHAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPG 115 The following BLAST results are available for this feature:
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623389 ID=BQ623389; Name=BQ623389; organism=Citrus sinensis; type=EST; length=432bpback to top |