BQ623389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.581e-17 Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 2 Query: 5 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPV 370 W AG +G YLG P SI ++ +V+++G +E F+ N + LYPGG++FDPLGLA DP A+L++ EIK+ RLAM + GF VQA TGKGPL N HL +P+ Sbjct: 165 WQDAGKVELVDGS-SYLGQPLPF---SISTLIWIEVLVIGYIE-FQRNA--ELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.029e-15 Identity = 54/127 (42.52%), Postives = 66/127 (51.97%), Query Frame = 2 Query: 5 WFKAGA-QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLENPVANN 379 W KA +G YLGNP V ++ +L + + + E R YPGG FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENL HL +P NN Sbjct: 112 WVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTMEKD---PEKKKYPGGA-FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.029e-15 Identity = 56/127 (44.09%), Postives = 69/127 (54.33%), Query Frame = 2 Query: 5 WFKAGAQIFSEGG-LDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLENPVANN 379 W KA GG YLG P V ++ +L + + + VE R + E YPGG FDPLG + DP F ELKVKEIKNGRLA+ ++ GF V Q+ G GPLENL HL +P NN Sbjct: 113 WVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR--SMEKDSEKKK-YPGGA-FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12 Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 137 FRINGLPGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENP 367 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL +P Sbjct: 184 FPNNKLTGTDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.122e-12 Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = 2 Query: 137 FRINGLPGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENP 367 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL +P Sbjct: 184 FPNNKLTGTDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.117e-11 Identity = 47/114 (41.23%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 5 WFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 346 W AG EG YLG P S+ ++ +V+++G +E R + L +YPGG YFDPLGLA DP LK+ EIK+ RLAM + F +QA TGKGP+ L Sbjct: 166 WQDAGKVELVEGS-SYLGQPLPF---SLTTLIWIEVLVVGYIEFQRNSELD---PEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFL 271 The following BLAST results are available for this feature:
BLAST of BQ623389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623389 ID=BQ623389; Name=BQ623389; organism=Citrus sinensis; type=EST; length=432bpback to top |