BQ623392

Overview
NameBQ623392
Unique NameBQ623392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:820..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = 3
Query:   12 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV-SCPYICGKYLDHGVLIVGYG--SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 356
            G+C  +    +A ++ +S +  ++++     V + P+A  I+A    Q Y GGV S P  CG  L+H + I+GYG  SSG          YWI++NSWG +WGE GY ++  G      VCG+
Sbjct:  215 GTCNANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGP--CGTSLNHAITIIGYGQDSSG--------TKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGI 327          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 41/131 (31.30%), Postives = 67/131 (51.15%), Query Frame = 3
Query:    3 TDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 389
            T  G C+ + ++    V +    I   E+++   L   GP+ V I+A  +  Y  G+     C  + L+H VL+VGY             PYWI+KN+WG +WGE+GY+++    N CG+ + + S A I+
Sbjct:  203 TANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQ--CANHGLNHAVLLVGYAVEN-------NIPYWILKNTWGTDWGEDGYFRVQQNINACGIRNELVSSAEIY 324          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11
Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3
Query:    6 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 371
            D   C++     AA  + F  I    ++     V   GP++V I+A     Q Y  G+     C    LDHGVL+VGYG  G        K YWI+KNSWGE WG+ GY  +   R N CG+ +  S
Sbjct:   95 DDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG-------GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 214          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.244e-11
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 3
Query:    6 DGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 371
            D  +C +     AA  + F  +   E  +   +   GP++V I+A     Q Y  G+     C  K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  208 DTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTD----SNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 329          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 3
Query:   15 SCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 356
            +C++D   I A VS++    S DE  +   +   GP++V I+A      +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY K+   R N C +
Sbjct:  202 NCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAI 314          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = 3
Query:   18 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQT---YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGVDSMVS 371
            C +D    AA  S +  +   DE+ +   +   GP++VGI+     +   Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG ++G+ GY ++    +N CG+ S  S
Sbjct:  211 CLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 326          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 3
Query:   15 SCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 371
            SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C +  ++H VL+VGYG+        K   YWIIKNSWGE+WG  GY  +   + N CG+ ++ S
Sbjct:  209 SCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLAS 325          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 3
Query:   78 DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 386
            +E  M   LV HGP+AV              ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG  WGE+GY++I  G + C ++S+  +   I
Sbjct:  356 NEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIAVAATPI 460          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.828e-11
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 3
Query:   78 DEDQMAANLVKHGPLAVGINA----------VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 386
            +E  M   LV  GP+AV              V+  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG +WGENGY++I  G + C ++S+  +   I
Sbjct:  356 NEALMKLELVHQGPMAVAFEVYDDFLHYRKGVYHHT---GLRDPFNPFELTNHAVLLVGYGTDAASGL-----DYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPI 460          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.000e-11
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 3
Query:   12 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 371
            GSCK  + ++ + ++ F  ++ + +    + V   P++V + A     Q Y  G+     CG   +HGV+IVGYG+          K YWI++NSWG+NWG  GY  I M RNV      CG+  + S
Sbjct:   94 GSCKPYRLRVVS-INGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGP-CGTAQNHGVVIVGYGTQS-------GKNYWIVRNSWGQNWGNQGY--IWMERNVASSAGLCGIAQLPS 210          
The following BLAST results are available for this feature:
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
BROM1_ANACO1.316e-1134.96Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATV_NPVOP1.718e-1131.30Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATL1_CHICK1.718e-1136.22Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATL1_CANFA2.244e-1134.92Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CRUST_PANBO3.828e-1136.13Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATS_RAT3.828e-1132.52Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATK_RAT3.828e-1133.87Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATC_PONAB3.828e-1132.74Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_BOVIN3.828e-1133.63Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
ERVB_TABDI5.000e-1133.59Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00483 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00483 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623392 ID=BQ623392; Name=BQ623392; organism=Citrus sinensis; type=EST; length=613bp
GGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCT
GTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAA
TTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGCCGTTTGGATGC
AAACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTG
GATCATGGAGTGCTTATCGTGGGCTATGGATCCTCAGGTTTCGCCCCGAT
CAGATTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGA
ACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGT
GGGGTCGACTCCATGGTCTCATCTGTAGCTGCTATCCATACAACCTCAAG
CTAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTCTGTACCTAGAT
ATTATAGGATATCCTTTTAAATATCCGTCTGCAATTATAACGATGCCTAC
ATGCCTGGGCTGAGGCATGAACTTTCTATGCTCTTGTAATATTTAAGCAT
ATGTCATGTCAGAATGTAATATTTATCTATTTTATAGTTAAAAAAAAAAA
AAAAAAAAAAAAC
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