BQ623396

Overview
NameBQ623396
Unique NameBQ623396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length534
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5657 contig Csv1_Contig5657:636..1166. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623396 vs. ExPASy Swiss-Prot
Match: FLRT_CITMA (Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase OS=Citrus maxima GN=C12RT1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.697e-11
Identity = 43/129 (33.33%), Postives = 71/129 (55.04%), Query Frame = 1 
Query:  169 DRSCIEWLGKQPVRSVLYVSFGSITLLKREQLIEFWHGLVDSKQRFLWVIR--PDSVIGEGDAL----AELVEGTKERGLLVSWVPQEEVLAHQAVAGFLTHSGW-NLTLGRV**PGVPMICWPYFADQ 534
            D   ++WL ++  RSV+Y SFGS      +++ +   GL+ ++  F+W  R  PD  +   +AL    AE +E   +  ++  WVPQ ++L H ++ GFL+H GW ++  G V   GVP+I  P   +Q
Sbjct:  246 DTKIMDWLSQKEPRSVVYASFGSEYFPSTDEIHDIAIGLLLTEVNFIWAFRLHPDEKMTIEEALPQGFAEEIERNNKGMIVQGWVPQAKILRHGSIGGFLSHCGWGSVVEGMV--FGVPIIGVPMAYEQ 372
The following BLAST results are available for this feature:
BLAST of BQ623396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
FLRT_CITMA1.697e-1133.33Flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltran... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00487 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00487 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623396 ID=BQ623396; Name=BQ623396; organism=Citrus sinensis; type=EST; length=534bp
ATACTCAACACGTTTGAAGACCTAGAAGAACCAATTCTGTCACATATACG
CACCAAATGCCCCAAAGTGTACACAATAGGACCTCTTCACTTGCAGCTCA
AGACAAGATTCGCCTCAAACATGATCTCATCGTCATCTCAAAAGTCTCCA
AACAGTCTCTGGGAAGTGGACAGAAGTTGCATTGAATGGCTTGGTAAACA
GCCTGTGCGGTCTGTACTGTACGTAAGCTTTGGTAGCATTACACTGTTGA
AAAGAGAACAGCTGATTGAGTTTTGGCACGGTCTTGTAGACAGTAAGCAG
CGGTTCTTGTGGGTCATTAGGCCAGATTCTGTGATTGGCGAAGGTGACGC
CCTGGCAGAGCTTGTGGAGGGCACGAAGGAGAGAGGTCTTTTGGTTAGTT
GGGTTCCACAGGAGGAGGTACTGGCTCACCAGGCTGTGGCTGGATTCTTG
ACACACAGCGGCTGGAACTTAACCCTTGGGAGAGTATAGTAACCCGGGGT
GCCAATGATTTGCTGGCCTTACTTTGCTGATCAA
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