BQ623397

Overview
NameBQ623397
Unique NameBQ623397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:   58 LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA 237
            +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +GA LA
Sbjct:  204 MAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query:   28 VAARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGW--DDHWIFWVGPFIGAALAALYHQVV 258
            + A D   P   APL IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FW+ P IGA L A  ++++
Sbjct:  148 MGATDKRAPAGFAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11
Identity = 35/72 (48.61%), Postives = 43/72 (59.72%), Query Frame = 1
Query:   67 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA-ALYHQVVIRAIPFK 279
            L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA  LY  V    +  K
Sbjct:  191 LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:   58 LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA 237
            +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +G+ LA
Sbjct:  205 MAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query:   43 SHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVV 258
            S VP+  AP+ IG  + L+HL +IP+T T +NPARS G A+    D      W+FWV P IGA +A +  ++V
Sbjct:  153 SRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQALFVG-DWAISQLWLFWVAPLIGAVIAGIVWKIV 224          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1
Query:   67 LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP +GA + +L +  ++
Sbjct:  162 LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 1
Query:   49 VPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            + I+APL IG  V    L   P  G  +NPAR+ G A++  +   W +HWI+WVGPFIG ALAAL ++ +I
Sbjct:  179 IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 1
Query:   46 HVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            HV  +APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPF+GA LA L ++ ++
Sbjct:  175 HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLV 243          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 1
Query:   28 VAARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGW--DDHWIFWVGPFIGAAL-AALY 246
            + A D+  P   AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FWV P IGAA+  ALY
Sbjct:  150 MGATDARAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            AP+ IG ++ L+HL +IP+T T +NPARS G A+    D    + W+FW+ P +GAALA L++   +
Sbjct:  163 APIAIGLSLTLIHLISIPVTNTSVNPARSTGPALFVG-DWAIAELWLFWLAPIVGAALAGLFYHAFL 228          
The following BLAST results are available for this feature:
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
AQY2_YEAST2.359e-1151.67Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQPZ_CHRVO3.081e-1142.50Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
AQP4_DIPME3.081e-1148.61Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQY1_YEAST4.024e-1150.00Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ1_RHIME4.024e-1143.84Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQP2_MOUSE4.024e-1146.15Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
TIP32_ARATH5.256e-1146.48Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_ORYSJ5.256e-1141.67Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
AQPZ_PSEPK5.256e-1146.75Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ_GLOVI5.256e-1143.28Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00488 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00488 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623397 ID=BQ623397; Name=BQ623397; organism=Citrus sinensis; type=EST; length=492bp
GGGTTTTCTCTGCCACTGACGCCAAACGTAGCCGCCAGAGACTCTCATGT
TCCTATTTTGGCTCCTTTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACT
TGGCTACTATCCCTATTACCGGAACTGGCATCAACCCCGCAAGGAGTCTT
GGAGCTGCAATCATCTACAACAAGGACCACGGTTGGGATGACCATTGGAT
TTTCTGGGTGGGACCATTCATTGGAGCAGCACTTGCAGCTTTGTACCACC
AGGTTGTGATCAGAGCCATTCCGTTCAAATCAAGCTGATGGTCTTATGAA
CGGTCGTGATTGCTGATGCATTTGTTTATGGCTGTCGTTGGTGGTTCTGT
TTTATATTTTAGATTATCCCAAGTCCATGCATTTTCGGTTCGTTAAATTT
TCTGGTTGTTTGGTTTTGTGTATGAATTTTCTGTAATGCCTATGCACAAA
GAAGCCGCTGGCAGTGGCTTTATTTAAATTTATGTAGTTTAT
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