BQ623415

Overview
NameBQ623415
Unique NameBQ623415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig22 contig Csv1_Contig22:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 57/173 (32.95%), Postives = 95/173 (54.91%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARVSDFGLAH------LASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +AL A++ +A+LHS      + +IK+SNILL   Y A++SDFGLA       L+  S+      GY APE   +  ++ ++DVYSFGVLLLE+L+GK         +  +L  W +  +  +    +     L  Q + EE V++  +A+ C +  P +RP+M +V   ++++
Sbjct:  180 VALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQL 352          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18
Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 3
Query:   18 GASRAIAYLH-SKGPANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSST----PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQ--ALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTS 494
            G + A++Y+H  + PA  H +I S NILL + YEA++SDFG A L  P S+         GY APE+  A KV++K DVYSFGVL LE++ G+ P    + L+    D    ++S+                   ++EE++++L++A+ C    P  RP+M  +++
Sbjct:  885 GVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPT--------PEIKEEVLEILKVALLCLHSDPQARPTMLSIST 1042          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18
Identity = 64/185 (34.59%), Postives = 94/185 (50.81%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE----------EMVQLLQLAINCTAQYPDNRPSMAEVT-SQIEEICRSSLQ 527
            +ALG +RA+ YLH    P+  H NIKSSNILL      R+SD+GL+     +S  N  +GY APE  D    + K+DVYSFGV++LELLTG+ P           L RW         T ++ D++ L   N+ +           + +   +   C    P+ RP M+EV  + +  + RSS++
Sbjct:  509 IALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSKFYLRTSQ-NLGEGYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWA--------TPQLHDIDAL--SNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEALVRMVQRSSMK 682          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18
Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKG-PANSHGNIKSSNILLSKSYEARVSDFGLAHL-----ASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL--LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +A   +R + +LH +  P+  H ++K+SN+LL K   ARV+DFGLA L     +  S+      GY APE     + + + DVYS+GVL +EL TG+        EE   L  W + V+    TA+   + L   +  N  E+M +LL++ + CTA +P  RP+M EV + + +I
Sbjct:  918 IATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDG--GEE--CLVEWARRVMTGNMTAKGSPITLSGTKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAMLVKI 1088          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18
Identity = 68/212 (32.08%), Postives = 110/212 (51.89%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARVSDFGLAH---LASPSSTPNRI---DGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQS-VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEIC----RSSLQQGQAHDLENGSS**AYSIDYREPSPSVM 611
            +ALGA+R +A+LH+  P   + + K+SNILL  +Y A++SDFGLA    +   S    R+    GY APE      +S K+DVYSFGV+LLELL+G+            +L  W +  +  +     V D  L    ++   + ++  LA++C +    +RP+M E+   +EE+      S  QQ     ++N  +    +++Y  P PS+M
Sbjct:  181 MALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRAL-KIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEASKEQQNPQISIDNIINKSPQAVNY--PRPSIM 389          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 67/180 (37.22%), Postives = 99/180 (55.00%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKS-YEARVSDFGLAHLASPSSTPNRID-----GYRAPEVTDARKV--SQKADVYSFGVLLLELLTGKAPTQALLNE-EGVDLPRWVQSVVKEEWTAEVFDLELLRYQN----VEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +A+  +R + YLH    A  HGN+K++NILL  +   ARV+D+ L  L + + T  +I      GYRAPE+  +RK   S K+DVY+FGV+LLE+LTG+     +  E EGVDL  WV+  V E   AE FD  L +        E+ M ++L +A+ C     + RP +  +   +  I
Sbjct:  860 IAVDVARGLNYLHFDR-AVPHGNLKATNILLDGAELNARVADYCLHRLMTQAGTVEQILDAGILGYRAPELAASRKPLPSFKSDVYAFGVILLEILTGRCAGDVITGEQEGVDLTDWVRLRVAEGRGAECFDSVLTQEMGSDPVTEKGMKEVLGIALRCIRSVSE-RPGIKTIYEDLSSI 1037          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 58/168 (34.52%), Postives = 92/168 (54.76%), Query Frame = 3
Query:   18 GASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHL--ASPSSTPNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 503
            G ++A+AYLH    P   H +IK+SNIL+   + A++SDFGLA L  +  S    R+ G   Y APE  +   +++K+D+YSFGVLLLE +TG+ P         V+L  W++ +V      EV D   L  +  +  + + L +++ C     + RP M++V   +E
Sbjct:  289 GTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVD-PRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLE 455          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 60/175 (34.29%), Postives = 95/175 (54.29%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKGPANS-HGNIKSSNILLSKSYEARVSDFGLAHLASPSSTP-----NRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALL-NEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEIC 512
            +A+  S A +YLH+   +   H +IKS+NILL + Y A+VSDFG +   S   T      +   GY  PE   +   ++K+DVYSFGV+L+EL+TG+ P   L   +E   L  + +  ++E    E+ D   +R     E+++ +  LA+ C  +    RP M EV++ +E IC
Sbjct:  556 IAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDAR-IRNDCKLEQVIAVANLALRCLKKTGKTRPDMREVSTALERIC 729          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 60/181 (33.15%), Postives = 94/181 (51.93%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSS----TPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVK------EEWTAEVFD---LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +ALG +  +AYLH    P   H +IK  NIL+    E  + DFGLA L   S+    T     GY APE        +++DVYS+GV+LLEL+T K         E  D+  WV+S +       E+    + D   ++ L   ++ E+++Q+ +LA++CT Q P  RP+M +    +E++
Sbjct:  931 VALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSF-PESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDV 1110          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 55/174 (31.61%), Postives = 97/174 (55.75%), Query Frame = 3
Query:    9 LALGASRAIAYLHS-KGPANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNRID-------GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 506
            +ALGA+R +AYLH+  G +  H ++KSSNILL +S  A+V+DFG +  A P    + +        GY  PE    +++S+K+DV+SFGV+LLE+++G+ P           L  W +  ++     E+ D  +    +  E + +++++A+ C   Y   RP M ++  ++E+
Sbjct:  699 IALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYA-PQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHA-EALWRVVEVALQCLEPYSTYRPCMVDIVRELED 870          
The following BLAST results are available for this feature:
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
BIK1_ARATH1.815e-1832.95Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y4885_ARATH2.370e-1834.34Probable LRR receptor-like serine/threonine-protei... [more]
SRF5_ARATH2.370e-1834.59Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
Y1743_ARATH3.095e-1834.86Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH3.095e-1832.08Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y4294_ARATH4.043e-1837.22Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH4.043e-1834.52Probable receptor-like protein kinase At2g42960 OS... [more]
WAKLL_ARATH4.043e-1834.29Putative wall-associated receptor kinase-like 13 O... [more]
PEPR1_ARATH4.043e-1833.15Leucine-rich repeat receptor-like protein kinase P... [more]
NORK_MEDTR4.043e-1831.61Nodulation receptor kinase OS=Medicago truncatula ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00506 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00506 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623415 ID=BQ623415; Name=BQ623415; organism=Citrus sinensis; type=EST; length=689bp
GGTCTGGCCTTGCTCTTGGAGCATCACGAGCGATTGCATACCTCCATTCA
AAGGGTCCTGCAAACTCTCATGGAAACATCAAGTCATCGAATATCCTCCT
ATCTAAATCCTATGAAGCTCGAGTTTCTGATTTTGGCCTTGCTCATCTTG
CGAGTCCCTCATCCACCCCCAACAGAATTGATGGCTACCGTGCCCCAGAG
GTGACAGACGCTCGCAAGGTATCCCAAAAAGCAGATGTCTACAGCTTTGG
TGTTTTGCTTCTGGAATTGCTTACAGGCAAGGCACCTACACAAGCCTTGC
TGAACGAGGAAGGAGTGGACCTCCCAAGATGGGTCCAATCTGTTGTAAAA
GAAGAGTGGACTGCCGAGGTTTTTGACCTCGAGCTTCTGAGATACCAAAA
TGTTGAGGAGGAGATGGTTCAACTCTTACAGCTTGCCATTAATTGCACCG
CTCAATATCCCGACAACCGCCCTTCCATGGCAGAAGTGACAAGCCAAATT
GAAGAAATCTGCCGGTCTAGCTTACAACAAGGACAAGCCCATGATTTGGA
AAACGGGTCTTCCTAGTAAGCTTATTCAATCGATTACCGTGAGCCTTCAC
CTTCAGTAATGGCCTGAAGAAGATGAGCAATCTTTCATTTGTTATCCCAG
TTTTATCATGCTAATCTAGTTCTTTAATTGTTGGGTAAA
back to top