BQ623416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNP6 (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psb28 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIG-DITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G DE VPDV+LT+SRDG NG A F F EP GE+ DITG Y++D+EG L + +V AKF+NG+P+ +EA Y+MRSP EWDRFMR M Sbjct: 5 IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGELATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFM 98
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNE7 (Photosystem II reaction center psb28 protein OS=Synechococcus elongatus (strain PCC 7942) GN=psb28 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.803e-25 Identity = 56/96 (58.33%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIG-DITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G DE VPDV+LT+SRDG NG A F F EP GE+ DITG Y++D+EG L + +V AKF+NG+P+ +EA Y+MRSP EWDRFMR M Sbjct: 5 IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGELATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFM 98
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYAPA (Photosystem II reaction center psb28 protein OS=Cyanophora paradoxa GN=psb28 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24 Identity = 55/95 (57.89%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQFIQG DE +PDVKL++S+DG+NG+A F F +P+VFD G+ITG Y+IDEEG L + V AKF+NG+P IEA YIM + EW+RF+R M Sbjct: 4 IQFIQGVDEEAIPDVKLSRSQDGANGIAKFYFDKPTVFDVYQ--GEITGLYLIDEEGELSTRTVYAKFINGKPQSIEASYIMNNREEWERFIRFM 96
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_THEEB (Photosystem II reaction center psb28 protein OS=Thermosynechococcus elongatus (strain BP-1) GN=psb28 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.270e-24 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 211 MAVKPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 M IQFI+G +E VPDV+LT++RDGS+G A+F F P + ++TG YM+DEEG + + DV+AKF+NG+P IEA Y MRSP+EWDRF+R M Sbjct: 1 MGAMAEIQFIRGINEEVVPDVRLTRARDGSSGQAMFYFDNPKIVQEGNL--EVTGMYMVDEEGEIVTRDVNAKFINGQPVAIEATYTMRSPQEWDRFIRFM 99
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_ACAM1 (Photosystem II reaction center psb28 protein OS=Acaryochloris marina (strain MBIC 11017) GN=psb28 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQFI+G DE +PDV+LT+++DGS+G AIF F P++ G++ ++ G Y+ DEEG L ++DVSAKFVNG+P IEA Y M+S EWDRFMR M Sbjct: 5 IQFIRGVDEEVIPDVRLTRAKDGSSGRAIFYFENPNLIQE-GKL-EVMGMYLQDEEGELTTLDVSAKFVNGKPHAIEANYDMKSEEEWDRFMRFM 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYAME (Photosystem II reaction center psb28 protein OS=Cyanidioschyzon merolae GN=psb28 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 226 TIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 +IQFIQG DE +P V+LT+SRDG G A+F F +P + GEI TG YMIDEEG + + +V AKFVNG+P IEA Y+M++ + W+RFMR M Sbjct: 3 SIQFIQGVDEDIIPTVRLTRSRDGQTGTAVFRFVQPKLLQQQGEI---TGMYMIDEEGEIVTREVQAKFVNGQPQIIEALYVMKNAQAWERFMRFM 95
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_NOSP7 (Photosystem II reaction center psb28 protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=psb28 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G DE+ +P+V+LT+SR G +G A F F+ P + D G DITG Y+ DEEG + + +V AKFVNG+P +EA Y+M+S +EWDRFMR M Sbjct: 4 IQFSRGLDEVVIPEVRLTRSRTGDSGTATFIFTNPKILDQ-GSTEDITGMYLSDEEGEIITREVKAKFVNGKPEALEALYVMKSAQEWDRFMRFM 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYACA (Photosystem II reaction center psb28 protein OS=Cyanidium caldarium GN=psb28 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVF---DSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 IQFI+G DE TVP+++LT+SRDG+ G AIFSF P+VF SS G+ITG Y+ D+EG L + +V+A FVNG+P +EA Y++R+ WDR MR Sbjct: 4 IQFIKGIDEQTVPEIRLTRSRDGNTGTAIFSFINPTVFLLHSSSQNYGEITGMYLQDDEGELSTRNVTANFVNGKPKAVEAVYLIRNKSGWDRLMR 99
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYAP8 (Photosystem II reaction center psb28 protein OS=Cyanothece sp. (strain PCC 8801) GN=psb28 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G E +PDV+LT+SR G +G A F F EPS+F+S ++TG Y++DEEG + + +V KF+NG+ + IEA IMRSP EWDRFMR M Sbjct: 4 IQFSRGVAEPVIPDVRLTRSRSGQSGTATFYFREPSIFNSEST-DEVTGMYLVDEEGEITTTEVKGKFINGKATDIEAILIMRSPEEWDRFMRFM 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_ANAVT (Photosystem II reaction center psb28 protein OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psb28 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G DE +P+V+LT+SR G G A F F+ P + D G DITG Y+IDEEG + + +V KFVNGRP +EA Y+M+S +EW+RF+R M Sbjct: 4 IQFSRGLDEEVIPEVRLTRSRTGDTGTATFIFTNPKILDQ-GTTEDITGMYLIDEEGEIITREVKGKFVNGRPEGVEAVYVMKSAQEWERFIRFM 97 The following BLAST results are available for this feature:
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623416 ID=BQ623416; Name=BQ623416; organism=Citrus sinensis; type=EST; length=697bpback to top |