BQ623416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_ANASP (Photosystem II reaction center psb28 protein OS=Anabaena sp. (strain PCC 7120) GN=psb28 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G DE +P+V+LT+SR G G A F F+ P + D G DITG Y+IDEEG + + +V KF+NGRP +EA Y+M+S +EW+RF+R M Sbjct: 4 IQFSRGLDEEVIPEVRLTRSRTGDTGTATFIFTNPKILDQ-GTTEDITGMYLIDEEGEIITREVKGKFINGRPEGLEAVYVMKSAQEWERFIRFM 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNP2 (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psb28 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.101e-22 Identity = 49/95 (51.58%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF QG +E VP ++LT+S DGS G A+FSF +P+ + +ITG Y+IDEEG + + +V AKF +G+P IEA+ +MRS EWDRFMR M Sbjct: 4 IQFSQGVNEPEVPGIRLTRSPDGSTGTAVFSFEDPAAL-AQESTDEITGMYLIDEEGEIVTREVKAKFYDGKPRIIEARLVMRSTAEWDRFMRFM 97 HSP 2 Score: 23.8682 bits (50), Expect = 8.101e-22 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 515 ERYANQNGLQFVK 553 ERYA +NGL+F K Sbjct: 98 ERYAAENGLEFTK 110
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_TRIEI (Photosystem II reaction center psb28 protein OS=Trichodesmium erythraeum (strain IMS101) GN=psb28 PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 1 Query: 226 TIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 TIQFIQG DE P+V+LT+SR G+ G A F +P +ITG YMIDEEG + S DV A+FVNG+P +E Y+M++ +EW+RFMR M Sbjct: 3 TIQFIQGIDEEVTPEVRLTRSRSGNQGTATLIFEDPKALGQD-VTQEITGMYMIDEEGQITSRDVKARFVNGQPKFLEGLYVMKTKQEWERFMRFM 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROM4 (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus (strain MIT 9211) GN=psb28 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.127e-20 Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 217 VKPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 + P IQF +G DE +P+++LT+S+DG G AIF F +P S GDITG +ID+EG L++ +V A+F+NG PS IEA Y ++ +++RFMR Sbjct: 6 INPAIQFYEGVDETAIPEIRLTRSKDGKTGQAIFVFQKPDAL-SEATTGDITGMTLIDDEGALKTREVKARFLNGEPSAIEATYTWKTESDFERFMR 101 HSP 2 Score: 20.7866 bits (42), Expect = 1.127e-20 Identity = 8/14 (57.14%), Postives = 10/14 (71.43%), Query Frame = 2 Query: 515 ERYANQNGLQFVKK 556 ERYA +NGL + K Sbjct: 104 ERYAKKNGLGYSSK 117
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYAA5 (Photosystem II reaction center psb28 protein OS=Cyanothece sp. (strain ATCC 51142) GN=psb28 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.127e-20 Identity = 45/95 (47.37%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G E VP+V+LT+++ G++G A F F P++ D+ DITG Y++DEEG + + +V KF+NG+P+ +EA IM S EWDRFMR M Sbjct: 4 IQFSRGVSEPVVPEVRLTRAKSGNSGTATFRFESPTILDAEST-DDITGMYLVDEEGEIVTREVKGKFINGKPTSVEAILIMNSQDEWDRFMRFM 97 HSP 2 Score: 22.3274 bits (46), Expect = 1.127e-20 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 515 ERYANQNGLQFVK 553 ERYA +NGL F K Sbjct: 98 ERYAQENGLGFSK 110
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNPW (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain WH7803) GN=psb28 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 220 KPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 K IQF +GTDE VPD++LT+SRDG G A F F +P + +G+I G +M+DEEG L + +V+ KFVNG+PS +EA Y ++ ++++RFMR Sbjct: 6 KAAIQFFRGTDEPVVPDIRLTRSRDGRTGQATFIFEQPEAL-APETLGNIAGMWMVDEEGELVTREVNGKFVNGKPSALEATYTWKTEQDFERFMR 100
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNY3 (Photosystem II reaction center psb28 protein OS=Synechocystis sp. (strain PCC 6803) GN=psb28 PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G E VP+V+L+KS++G +GMA F F EP++ + DITG Y+ID+EG + + +V KF+NGRP+ IEA I+ S EWDRFMR M Sbjct: 4 IQFSKGVAETVVPEVRLSKSKNGQSGMAKFYFLEPTIL-AKESTDDITGMYLIDDEGEIITREVKGKFINGRPTAIEATVILNSQPEWDRFMRFM 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROM3 (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus (strain MIT 9303) GN=psb28 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 IQFI+G DE VPD+KLT+S DG G A+F F +P + G ITG +M+DEEG L + +V+A+FVNG+PS +E YI +S +++RFMR Sbjct: 10 IQFIRGVDEPVVPDIKLTRSSDGRTGRALFVFDQPEIMAPETWAG-ITGMFMLDEEGELVTREVNARFVNGQPSALEVTYIWKSEEDFERFMR 101
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYAP7 (Photosystem II reaction center psb28 protein OS=Cyanothece sp. (strain PCC 7424) GN=psb28 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.204e-19 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G E +P ++LT+SR G +G A F F P++F + + ++TG Y+ID EG + S +V KF+NG+P IEA IM SP EW+RFMR M Sbjct: 4 IQFARGLVEDAIPTIRLTRSRTGDSGTATFYFESPNIF-ADEQTQEVTGMYLIDSEGEIVSREVKGKFINGKPHAIEAILIMNSPDEWERFMRFM 97 HSP 2 Score: 22.7126 bits (47), Expect = 1.204e-19 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 515 ERYANQNGLQFVK 553 ERYA ++GL+F K Sbjct: 98 ERYAQEHGLEFTK 110
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_MICAN (Photosystem II reaction center psb28 protein OS=Microcystis aeruginosa (strain NIES-843) GN=psb28 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.204e-19 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF +G E VPD++L++++ G G A F F +P++ + +ITG Y+IDEEG + + V KF+NG+P IEA I SP EWDRFMR M Sbjct: 4 IQFSKGLKEPVVPDIRLSRTKTGEKGSAEFYFKQPTILGDQ-QTEEITGMYLIDEEGEIVTTKVKGKFINGKPMAIEATVIFNSPAEWDRFMRFM 97 HSP 2 Score: 23.483 bits (49), Expect = 1.204e-19 Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 515 ERYANQNGLQFVK 553 ERY ++NGL+F K Sbjct: 98 ERYGSENGLEFTK 110 The following BLAST results are available for this feature:
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623416 ID=BQ623416; Name=BQ623416; organism=Citrus sinensis; type=EST; length=697bpback to top |