BQ623416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROMA (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus GN=psb28 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 45/94 (47.87%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 226 TIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 TI+F++G DE ++P+++LT+SRDG G A F+F EP S+ + G I G M DEEG L++ +V A+FVNG PS +EA Y+ +S ++ RFMR Sbjct: 9 TIRFLEGIDETSIPEIRLTRSRDGRTGQAFFTFEEPQAL-SAVKDGSIQGMSMFDEEGELKTREVKARFVNGTPSALEATYVWKSESDFQRFMR 101
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_CYAP4 (Photosystem II reaction center psb28 protein OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psb28 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 45/95 (47.37%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVM 513 IQF++G +E VPDV+LT+++DG+ G A+F F P + +I G YM+DEEG + + +V+AKF+NG+ + IEA Y +RS EWDRF+R M Sbjct: 4 IQFVRGVNEGVVPDVRLTRAKDGNTGRAVFYFDNPQLVQEGNL--EIMGMYMVDEEGEIVTREVNAKFINGKATAIEAIYTIRSAPEWDRFIRFM 96
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROMM (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus (strain MIT 9313) GN=psb28 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.684e-19 Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 IQF +G DE VPD+KLT+S DG G A+F F +P + G ITG +MIDEEG L + +V+A+FVNG+PS +E YI +S +++RFMR Sbjct: 10 IQFTRGVDEPVVPDIKLTRSSDGRTGRALFVFDQPEIMAPETWAG-ITGMFMIDEEGELVTREVNARFVNGKPSALEVTYIWKSEADFERFMR 101
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNPX (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain WH8102) GN=psb28 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 45/96 (46.88%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 220 KPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 K +IQF +G DE VPD++LT+SRDG G A F F +P+ + +GDITG +M+DEEG + + +++ KFVNG S +EA Y +S ++++RFMR Sbjct: 3 KASIQFFRGVDEPVVPDIRLTRSRDGLTGQATFRFEQPAAI-APETMGDITGMWMVDEEGEMVTREINGKFVNGTASALEAVYSWKSVQDFERFMR 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNSC (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain CC9605) GN=psb28 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 45/96 (46.88%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 220 KPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMR 507 K IQF +G +E VPD++LT+SRDG G A F F +P+ + +GDITG +M+DEEG + + +V+ KFVNG S +EA Y +S ++++RFMR Sbjct: 3 KAAIQFFRGVNEPVVPDIRLTRSRDGRTGQATFRFEQPAAI-APETMGDITGMWMVDEEGEMVTREVNGKFVNGTASALEAVYSWKSEQDFERFMR 97
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROM9 (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus (strain MIT 9312) GN=psb28 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVMGAVC*SEWLAICQE 555 IQF +GTDE VP+++LT+S+DG++G A+F F +P S + G+ITG MID EG + + +V KFV+G P +EA YI +S ++DRFMR + S L ++ Sbjct: 9 IQFYEGTDEPVVPEIRLTRSKDGTSGQALFQFEKPQALSSITD-GEITGMRMIDAEGEILTREVKVKFVDGEPIFLEAVYIWKSTSDFDRFMRFANSYAKSNGLGYSEK 116
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNS3 (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain CC9311) GN=psb28 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 220 KPTIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGD-ITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVMGAVC*SEWLAICQE 555 K IQF++G DE VPD+++T+SRDG G AIF F +P + E+ + ITG +M+DEEG L + +V+ KFVNG+ S +EA Y +S ++++RFMR S L Q+ Sbjct: 6 KAVIQFLRGVDEPVVPDIRVTRSRDGRTGQAIFVFEQPEAL--APEVMEAITGMFMLDEEGMLVTREVNGKFVNGKASALEATYTWKSEQDFERFMRFAQRYADSSGLGYSQD 116
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROM2 (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus (strain MIT 9215) GN=psb28 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVMGAVC*SEWLAICQE 555 IQF +GTDE VP+++LT+S+DG+ G A+F F +P S + G+ITG MID EG + + +V KFV+G P +EA YI ++ ++DRFMR + S L ++ Sbjct: 9 IQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITD-GEITGMRMIDSEGEILTKEVKVKFVDGEPIYLEAVYIWKNSSDFDRFMRFANSYAKSNGLGYSEK 116
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_PROM0 (Photosystem II reaction center psb28 protein OS=Prochlorococcus marinus (strain MIT 9301) GN=psb28 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 229 IQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVMGAVC*SEWLAICQE 555 IQF +GTDE VP+++LT+S+DG+ G A+F F +P S + G+ITG MID EG + + +V KFV+G P +EA YI ++ ++DRFMR + S L ++ Sbjct: 9 IQFYEGTDEPVVPEIRLTRSKDGTTGQALFLFEKPQALSSITD-GEITGMRMIDSEGEILTREVKVKFVDGEPIFLEAVYIWKNTPDFDRFMRFANSYAKSNGLGYSEK 116
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Match: PSB28_SYNS9 (Photosystem II reaction center psb28 protein OS=Synechococcus sp. (strain CC9902) GN=psb28 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 226 TIQFIQGTDELTVPDVKLTKSRDGSNGMAIFSFSEPSVFDSSGEIGDITGFYMIDEEGTLQSVDVSAKFVNGRPSRIEAKYIMRSPREWDRFMRVMGAVC*SEWLAICQEMR 561 +IQF +G DE VPD++LT+SRDG G A F F +P + G+I G +M+DEEG + + +V+ KFVNG PS +EA Y ++ +++RFMR S L Q + Sbjct: 9 SIQFFRGVDEPVVPDIRLTRSRDGRTGQATFVFEQPQAL-APETFGNIGGMWMVDEEGEMVTREVNGKFVNGIPSALEATYTWKTEEDFERFMRFAQRYADSNGLGYSQNQK 119 The following BLAST results are available for this feature:
BLAST of BQ623416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623416 ID=BQ623416; Name=BQ623416; organism=Citrus sinensis; type=EST; length=697bpback to top |