BQ623417

Overview
NameBQ623417
Unique NameBQ623417
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7835 contig Csv1_Contig7835:691..1337. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: OMT7_DICDI (O-methyltransferase 7 OS=Dictyostelium discoideum GN=omt7 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.978e-16
Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 1
Query:    4 FEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPA---FPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQ 447
            F   N+VVDVGG  G  +  ++ KY ++ GI FDL  VI  +      P +E+V G  F SVP  D   +K I HDW DE C++ LK   +++  N K+ + + I+    D +   K+ + +D + + H    +ER+  +++ L   + F+
Sbjct:  176 FSSFNTVVDVGGSHGRIVGELVKKYENLNGIVFDLETVINSSIEKIKHPRIEYVSGSFFESVPSADCYVLKNILHDWDDEKCLEILKTISKSMKENSKIFIFDEII----DPNDYRKLSLFLD-VTVFHFFNSRERSLNDWKQLCDKSDFK 321          
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.516e-16
Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = 1
Query:   19 SVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPA---FPGVEHVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQ 447
            +VVD+GG  G  +  ++ +YP++ GINFD   VI  +      P ++HV GD F SVP+ D   +K I   +SDE C + LK   +++  N K+I+ + IL    D+S       ++D +M+     GK+R+  E+  L + +GF+
Sbjct:  174 TVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL----DSSKYLNFDTYLDILMM-ETLDGKQRSLSEWIKLFEMSGFK 314          
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: HIOM_BOVIN (Hydroxyindole O-methyltransferase OS=Bos taurus GN=ASMT PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.567e-13
Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 1
Query:   22 VVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAPA-FPGVE------HVGGDMFVSVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQ 447
            + D+GGG GA     +S YP  + I FD+P V+Q A   F   E      H G     ++P+ D   +  + HDW+D  C   L+  Y A    G ++V ES+L    DT     +   +  + +     G+ERT  E+RAL   AGF+
Sbjct:  183 ICDLGGGSGALAKACVSLYPGCRAIVFDIPGVVQIAKRHFSASEDERISFHEGDFFKDALPEADLYILARVLHDWTDAKCSHLLQRVYRACRTGGGILVIESLL----DTDGRGPLTTLLYSLNMLVQTEGRERTPAEYRALLGPAGFR 327          
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: HIOM_MACMU (Hydroxyindole O-methyltransferase OS=Macaca mulatta GN=ASMT PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.956e-13
Identity = 48/156 (30.77%), Postives = 73/156 (46.79%), Query Frame = 1
Query:   10 GLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAP---AFPGVEHVG---GDMFVS-VPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQ 456
            G   + D+GGG GA     +S YP  K   FD+P V++ A    +FP  E +    GD F   +P+ D   +  I HDW+D  C   L+  Y      G ++V ES+L    D      ++  +  + +     G+ERT   +  L  +AGF+ FQ
Sbjct:  179 GFPLMCDLGGGPGALAKECLSLYPGCKVTVFDVPEVVRTAKQHFSFPEEEEIHLQEGDFFKDPLPEADLYILARILHDWADGKCSHLLERVYHTCKPGGGILVIESLL----DEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330          
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: HIOM_CHICK (Hydroxyindole O-methyltransferase OS=Gallus gallus GN=ASMT PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.042e-12
Identity = 49/153 (32.03%), Postives = 71/153 (46.41%), Query Frame = 1
Query:   22 VVDVGGGIGATLNMIISKYPSIKGINFDLPHVIQDA------PAFPGVEHVGGDMFV-SVPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQV 459
            + D+GGG GA     +  YP+     +DLP V+Q A      P    +    GD F  S+P+ D   +  I HDW D+ C + L   Y+A    G V++ ES+L        +  V   +  + +     GKERT  E+  L  AAGF+  QV
Sbjct:  184 IYDLGGGGGALAQECVFLYPNCTVTIYDLPKVVQVAKERLVPPEERRIAFHEGDFFKDSIPEADLYILSKILHDWDDKKCRQLLAEVYKACRPGGGVLLVESLL----SEDRSGPVETQLYSLNMLVQTEGKERTAVEYSELLGAAGFREVQV 332          
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: HIOM_HUMAN (Hydroxyindole O-methyltransferase OS=Homo sapiens GN=ASMT PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.467e-11
Identity = 45/150 (30.00%), Postives = 69/150 (46.00%), Query Frame = 1
Query:   28 DVGGGIGATLNMIISKYPSIKGINFDLPHVIQDAP---AFPGVEHVG---GDMFVS-VPKGDAIFIKWICHDWSDEHCVKFLKNCYEALPVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQ 456
            D+GGG GA     +S YP  K   FD+P V+  A    +F   E +    GD F   +P+ D   +  + HDW+D  C   L+  Y      G ++V ES+L    D      ++  +  + +     G+ERT   +  L  +AGF+ FQ
Sbjct:  185 DLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL----DEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330          
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Match: TCMN_STRGA (Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN OS=Streptomyces glaucescens GN=tcmN PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 49/170 (28.82%), Postives = 81/170 (47.65%), Query Frame = 1
Query:    1 GFEGLNSVVDVGGGIGATLNMIISKYPSIKGINFDLPH-------VIQDAPAFPGVEHVGGDMFVS-VPKG-DAIFIKWICHDWSDEHCVKFLKNCYEAL-PVNGKVIVAESILPVTPDTSLASKVVIHVDCIMLAHNPGGKERTEQEFRALAKAAGFQGFQVVSSAFNT 480
            G E  + + D+GGG G  L  I+ ++P   G+  DLP        V+++A     V  + GD F   VP G DA   K + H+WSDE  V  L+   EA+   + ++++ + ++   P+       ++ +D ++L    GG+ER   E+R L   A F      S  + T
Sbjct:  324 GMERFSRIADLGGGDGWFLAQILRRHPHATGLLMDLPRVAASAGPVLEEAKVADRVTVLPGDFFTDPVPTGYDAYLFKGVLHNWSDERAVTVLRRVREAIGDDDARLLIFDQVM--APENEWDHAKLLDIDMLVLF---GGRERVLAEWRQLLLEADFDIVNTPSHTWTT 488          
The following BLAST results are available for this feature:
BLAST of BQ623417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
OMT7_DICDI1.978e-1631.79O-methyltransferase 7 OS=Dictyostelium discoideum ... [more]
OMT11_DICDI7.516e-1633.56Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
HIOM_BOVIN1.567e-1332.21Hydroxyindole O-methyltransferase OS=Bos taurus GN... [more]
HIOM_MACMU5.956e-1330.77Hydroxyindole O-methyltransferase OS=Macaca mulatt... [more]
HIOM_CHICK5.042e-1232.03Hydroxyindole O-methyltransferase OS=Gallus gallus... [more]
HIOM_HUMAN1.467e-1130.00Hydroxyindole O-methyltransferase OS=Homo sapiens ... [more]
TCMN_STRGA5.574e-1128.82Multifunctional cyclase-dehydratase-3-O-methyl tra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00508 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00508 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623417 ID=BQ623417; Name=BQ623417; organism=Citrus sinensis; type=EST; length=646bp
GGGTTTGAAGGCCTCAACTCAGTTGTCGACGTTGGTGGTGGAATTGGAGC
CACACTTAACATGATTATCTCCAAGTATCCATCCATTAAAGGCATTAACT
TTGATTTGCCACATGTTATTCAGGATGCTCCAGCTTTTCCTGGTGTCGAG
CATGTTGGGGGAGACATGTTTGTTAGTGTTCCAAAGGGAGATGCCATTTT
TATCAAGTGGATATGTCATGATTGGAGTGATGAGCACTGCGTGAAATTCT
TGAAGAACTGCTATGAAGCACTCCCAGTAAATGGGAAAGTCATTGTTGCT
GAATCTATCCTCCCAGTAACCCCGGACACAAGCCTTGCATCCAAAGTAGT
CATCCATGTCGACTGCATCATGTTGGCTCATAACCCGGGTGGCAAAGAGA
GGACTGAACAAGAGTTCAGAGCATTGGCTAAGGCTGCTGGATTCCAAGGT
TTCCAAGTTGTGAGCTCTGCTTTTAATACTTACATTATGGAATTTCTCAA
GAGTGCTTGAGTCTTTTGTTCTACTGGACTTGCATCTCGAATTACCGTGG
CTTTCCTATATACGTGTTTCTCTCCATTGCAAACAATAAAAAAGTGAATT
TGAGTTTGCTTATTTTTAATAAATATTAAATTTTGTAAAAAAAAAA
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