BQ623418

Overview
NameBQ623418
Unique NameBQ623418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:664..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.536e-41
Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V             SR+IGID++  +F+ A+ FG TEFVNPKDHDKP+QQVL ++T+GGVD S EC GN++ M  A EC H GWG +V+ G
Sbjct:  156 HVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVG 296          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.536e-41
Identity = 79/141 (56.03%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+PQAPLDKVC+L CG  TGLGA  N AK   GS VAVFGLG V             SR+IG+D++P +F+ A+ FG TEFVNPKDH+KP+Q+VL ++T+GGVD S EC GN++ M  A EC H GWG +V+ G
Sbjct:  156 HVGCVAKINPQAPLDKVCVLSCGYSTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVG 296          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 4.469e-41
Identity = 76/141 (53.90%), Postives = 97/141 (68.79%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   +AKI+PQ+PLDKVC+L CG+ TGLGA  N  K + GS VAVFGLG V             SR+IG+D++  +F+ AK FG+TEFVNPKDH KP+Q+V+ +LT+GGVD S EC GN+  M  A EC H GWG +V+ G
Sbjct:  157 HVGCLAKINPQSPLDKVCILSCGISTGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVG 297          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.469e-41
Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P+APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V             SR+IG+D++  +F+ A+ FG TEFVNPKDH KP+QQVL D+T+GGVD S EC GNV+ M  A EC H GWG +V+ G
Sbjct:  156 HVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVG 296          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 7.624e-41
Identity = 75/141 (53.19%), Postives = 100/141 (70.92%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   +AKI+P+APLDKVC+L CG+ TGLGA  N AK + GS VA+FGLG V             SR+IG+D++P K+++AK FG T+FVNPKDH KP+Q+VLV++T+GGVD + EC G++  M A  EC H GWG +V+ G
Sbjct:  156 HVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVG 296          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 9.957e-41
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P APLDKVC+L CG+ TGLGA  N AK +PGS VA+FGLG V             SR+IG+D+   +F+ AK FGV EFVNPK+HDKP+QQV+ ++T+GGVD + EC G++  M +A EC H GWG +V+ G
Sbjct:  157 HAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVG 297          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.698e-40
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V             SR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+ G
Sbjct:  157 HVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.698e-40
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V             SR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+ G
Sbjct:  157 HVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.698e-40
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V             SR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+ G
Sbjct:  157 HVGCVAKINPLAPLDKVCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 2.897e-40
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H   VAKI+P APLDKVC+L CG+ TGLGA  N AK   GS VA+FGLG V             SR+IG+D++  +F++AK FGVTEFVNPKD+ KP+Q+V+ ++TDGGVD S EC G++  M +A EC H GWG +V+ G
Sbjct:  157 HVGCVAKINPLAPLDKVCVLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVG 297          
The following BLAST results are available for this feature:
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_ORYSI1.536e-4156.03Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH1_MAIZE1.536e-4156.03Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH_FRAAN4.469e-4153.90Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_HORVU4.469e-4156.03Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH3_HORVU7.624e-4153.19Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_PEA9.957e-4153.90Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH3_SOLTU1.698e-4053.90Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.698e-4053.90Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_SOLTU1.698e-4053.90Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLLC2.897e-4053.90Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00509 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00509 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623418 ID=BQ623418; Name=BQ623418; organism=Citrus sinensis; type=EST; length=435bp
CATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGT
ATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACA
CTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACT
GTTGGCCTTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGT
TATTGGTATAGATATTGACCCGAAAAAGTTTGATAGAGCAAAGAATTTTG
GAGTTACTGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAG
GTCCTTGTCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCAT
TGGCAATGTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCT
GGGGAACATCAGTTATTGGTGGGTGTTGCTGCATC
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