BQ623418

Overview
NameBQ623418
Unique NameBQ623418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:664..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.295e-37
Identity = 78/141 (55.32%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H+ +VAKID  APL+KVCL+GCG  TG GA   TAKVEPGS  AVFGLG V             SR+IG+DI+  KF +AK  G T+ VNPKD  KPI +VL+++T  GVDYSFE IG+   M AAL  CH  +G SVI G
Sbjct:  153 HETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVIVG 293          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 2.998e-37
Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS+ AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.915e-37
Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKD---HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            DVSV  IDP+APLD  CLLGCGV TG GA   TA V+ G  VAVFG GTV             S++I IDI+ KK      FG T+FVNPK+    D+ I + L+++TDGG+D++F+C GN  +MR ALE CHKGWG S+I G
Sbjct:  159 DVSVVAIDPKAPLDAACLLGCGVTTGFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASKIIAIDINNKKKQYCSQFGATDFVNPKEDLAKDQTIVEKLIEMTDGGLDFTFDCTGNTKIMRDALEACHKGWGQSIIIG 301          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.114e-37
Identity = 78/141 (55.32%), Postives = 90/141 (63.83%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H+ + AKID  APL+KVCL+GCG  TG GAV  TAKVEPGS  AVFGLG V             SR+I IDI+  KF +AK  G TE VNPKD  KPI +VL ++T  GVDYSFE IG +  M  AL  CH  +G SVI G
Sbjct:  154 HETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATECVNPKDFKKPIHEVLTEMTGKGVDYSFEVIGRIETMTEALASCHYNYGVSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 8.722e-37
Identity = 74/138 (53.62%), Postives = 94/138 (68.12%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 8.722e-37
Identity = 74/138 (53.62%), Postives = 94/138 (68.12%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 8.722e-37
Identity = 74/138 (53.62%), Postives = 94/138 (68.12%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL+KVCL+GCG  TG G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.139e-36
Identity = 76/141 (53.90%), Postives = 90/141 (63.83%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H+ + AKID  APL+KVCL+GCG  TG GAV  TAKVE GS  AVFGLG V             SR+I +DI+  KF +AK  G TE +NPKD  KPI +VL ++T  GVDYSFE IG +  M AAL  CH  +G SVI G
Sbjct:  155 HETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEAGSTCAVFGLGGVGLSVVMGCKAAGASRIIAVDINKDKFAKAKELGATECINPKDFKKPIHEVLTEMTGQGVDYSFEVIGRIETMTAALASCHNNYGVSVIVG 295          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.488e-36
Identity = 74/138 (53.62%), Postives = 93/138 (67.39%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            S+AKID  APLDKVCL+GCG  TG GA  NTA+VEPGS  AVFGLG V             S++ GIDI+  KF  AK  G T+ +NP+D  KP+Q+++ ++T+GGVD++ ECIGN  VM+AA E    GWGT VI G
Sbjct:  161 SLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAGASKIFGIDINKDKFPLAKKLGATDCLNPQDIRKPVQEIIAEMTNGGVDFAIECIGNPDVMKAAFESTTVGWGTCVIVG 298          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 1.488e-36
Identity = 74/138 (53.62%), Postives = 94/138 (68.12%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL KVCL+GCG  TG G+  N AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D++KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLAKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYNKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
The following BLAST results are available for this feature:
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_STRCA2.295e-3755.32Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1B_PAPHA2.998e-3753.62Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
FADH_YEAST3.915e-3752.45S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADH1_COTJA5.114e-3755.32Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1B_PANTR8.722e-3753.62Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN8.722e-3753.62Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1A_HUMAN8.722e-3753.62Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
ADH1_CHICK1.139e-3653.90Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]
ADH4_STRCA1.488e-3653.62Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1A_PONAB1.488e-3653.62Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00509 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00509 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623418 ID=BQ623418; Name=BQ623418; organism=Citrus sinensis; type=EST; length=435bp
CATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGT
ATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACA
CTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACT
GTTGGCCTTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGT
TATTGGTATAGATATTGACCCGAAAAAGTTTGATAGAGCAAAGAATTTTG
GAGTTACTGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAG
GTCCTTGTCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCAT
TGGCAATGTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCT
GGGGAACATCAGTTATTGGTGGGTGTTGCTGCATC
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