BQ623418

Overview
NameBQ623418
Unique NameBQ623418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:664..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.329e-36
Identity = 76/144 (52.78%), Postives = 93/144 (64.58%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP----IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+S+ K++P+APL+KV LLGCG+ TG GAV NT KVE GS VAV+GLG V              +++GID+   KF+ AK FG TE +NPK  + P     Q  LV+  DGG DY+FECIGNV  MR ALE  HKGWG S I G
Sbjct:  157 DISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIG 300          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 4.329e-36
Identity = 73/138 (52.90%), Postives = 93/138 (67.39%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL+KVCL+GCG  TG G+    AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.654e-36
Identity = 71/140 (50.71%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            ++SVAKID  APL+KVCL+ CG  TG GA  NTAKV PGS  AVFGLG V             +R+IG+D++ +KF +A+  G TE +NP+D  KPIQ+VL D+TD G+D+ FE IGN+ V+ AAL  C++ +G  V+ G
Sbjct:  155 EISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGSSVVMGCKAAGATRIIGVDVNKEKFKKARELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 7.384e-36
Identity = 71/140 (50.71%), Postives = 95/140 (67.86%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            ++SVAKID  APL+KVCL+ CG  TG GA  NTAKV PGS  AVFGLG V             +R+IG+D++ +KF +A+  G TE +NP+D  KPIQ+VL D+TD G+D+ FE IGN+ V+ AAL  C++ +G  V+ G
Sbjct:  155 EISVAKIDAVAPLEKVCLISCGFSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 7.384e-36
Identity = 72/138 (52.17%), Postives = 93/138 (67.39%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +P++KVCL+GCG  TG G+    AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPMEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 9.644e-36
Identity = 69/137 (50.36%), Postives = 91/137 (66.42%), Query Frame = 1
Query:   13 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            V KIDP +PL ++ LL CGV TG+GA WN A V+ G   AVFGLG+V             SR+IG+D +  KF++ K  GVT+F+NPKD  KP+ Q++ ++T GGVDYSFEC GNV V+R A    H GWG++V+ G
Sbjct:  171 VVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFEKGKLMGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVG 307          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.260e-35
Identity = 77/141 (54.61%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H+ +VAKI   APL+KVCL+GCG  TG GA   TAKVEPGS  AVFGLG V             SR+I IDI+  KF +AK  G T+ VNPKD  KPI +VL+++T  GVDYSFE IG+   M AAL  CH  +G SVI G
Sbjct:  154 HETAVAKIAAAAPLEKVCLIGCGFSTGYGAAVQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 1.645e-35
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D++VAKID  +PLDKVCL+GCG  TG G+    AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M +AL  CH   G SV+ G
Sbjct:  155 DIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 2.148e-35
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D++VAKID  APLDKVCL+GCG  TG G+    AKV PGS  AVFGLG V             +++I +DI+  KF +AK  G T+ +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  M +AL  CH   G SVI G
Sbjct:  156 DIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDINKDKFAKAKELGATDCINPQDYTKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHSACGVSVIVG 295          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 2.148e-35
Identity = 72/138 (52.17%), Postives = 92/138 (66.67%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +VAKID  +PL+KVCL+GCG  TG G     AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP+D+ KPIQ+VL ++TDGGVD+SFE IG +  + A+L CCH+  GTSVI G
Sbjct:  157 AVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTIMASLLCCHEACGTSVIVG 294          
The following BLAST results are available for this feature:
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHX_CAEEL4.329e-3652.78Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH1G_HUMAN4.329e-3652.90Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C ... [more]
ADH6_PONAB5.654e-3650.71Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]
ADH6_HUMAN7.384e-3650.71Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
ADH1A_MACMU7.384e-3652.17Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADHL3_ARATH9.644e-3650.36Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADH1_APTAU1.260e-3554.61Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_MOUSE1.645e-3551.43Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1_RAT2.148e-3551.43Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1G_PAPHA2.148e-3552.17Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00509 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00509 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623418 ID=BQ623418; Name=BQ623418; organism=Citrus sinensis; type=EST; length=435bp
CATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGT
ATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACA
CTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACT
GTTGGCCTTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGT
TATTGGTATAGATATTGACCCGAAAAAGTTTGATAGAGCAAAGAATTTTG
GAGTTACTGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAG
GTCCTTGTCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCAT
TGGCAATGTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCT
GGGGAACATCAGTTATTGGTGGGTGTTGCTGCATC
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