BQ623418

Overview
NameBQ623418
Unique NameBQ623418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:664..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.806e-35
Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            H     K+DP APL K+CLL CGV  GLGA WN A V+ GS V +FGLGTV             ++++G+DI+P K ++AK FGVT+F+N  D  +PI QV+  +T GG D+SFEC+G+  +   AL+ C  GWG +V  G
Sbjct:  158 HSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLG 298          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 2.806e-35
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            ++SVAKID  +PL+KVCL+GCG  TG G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G TE VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M AAL CC + +G SVI G
Sbjct:  154 EISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVG 293          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 6.251e-35
Identity = 71/140 (50.71%), Postives = 93/140 (66.43%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            ++SVAKID  +PL+KVCL+GCG  TG G+    AKV  GS  AVFGLG V             +R+IG+DI+  KF +AK  G TE VNP+D+ KPIQ+VL ++++GGVD+SFE IG +  M  AL CC + +G SVI G
Sbjct:  155 EISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 8.164e-35
Identity = 72/140 (51.43%), Postives = 93/140 (66.43%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +++VAKID  APL+KVCL+GCG  TG G+    AKV PGS  AVFGLG V             SR+I +DI+  KF +AK  G TE +NP+D+ KPIQ+V+ +++DGGVD+SFE IG +  + AAL  CH   GTSVI G
Sbjct:  155 EIAVAKIDAAAPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFPKAKEVGATECINPQDYKKPIQEVIQEISDGGVDFSFEVIGRLDTVVAALLSCHGACGTSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 144.821 bits (364), Expect = 1.393e-34
Identity = 70/140 (50.00%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+++AKID  A L++VCLLGCG  TG GA  N AKV PGS  AVFGLG V             SR+IGIDI+ +KF +AK  G T+ +NP+D  KPIQ+V+++LT GGVD++ +C G    M+AAL+C   GWG+    G
Sbjct:  160 DINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIG 299          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.819e-34
Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +++VAKI   APL+KVCL+GCG  TG G+  NT KV+PGS  AVFGLG V             SR+IG+D++  KF  AK  G TE +NPKD++ PI +VL  +TD GVDY+FE IGN +VM +AL   H G G +VI G
Sbjct:  155 EIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDYNIPIHEVLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 9.026e-34
Identity = 70/140 (50.00%), Postives = 91/140 (65.00%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +++VAKID  +PL+KVCL+GCG  TG G+    AKV PGS  AVFGLG V             +R+I +DI+  KF +AK  G TE +NP D+ KPIQ+VL ++TDGGVD+SFE IG +  M ++L  CH   G SVI G
Sbjct:  155 EMAVAKIDGASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPLDYSKPIQEVLQEMTDGGVDFSFEVIGRLDTMTSSLLSCHASCGVSVIVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 1.540e-33
Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            DV++AKID  A L++VCL+GCG  TG GA  NTAKV PGS  AVFGLG V             SR+I IDI+  KF +AK  G T+ +NP++ +KP+Q V+V++T+GGVD++ +C G   VM+A ++C   GWG+    G
Sbjct:  160 DVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSAIMGCKTAGASRIIAIDINSDKFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCATVGWGSCTFVG 299          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.626e-33
Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD------GGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +++VAK+   AP DK+C +GCGV TG+GAV NTAKVE G+   VFGLG +               +IG+D++  K   A++FG+T F+NPK+ +  +Q++ V+LT       GG DYSF+C GNV VMR ALEC H+GWG S+I G
Sbjct:  150 EIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGADMIIGVDLNDDKKPMAEHFGMTHFINPKNCENVVQEI-VNLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 2.626e-33
Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            + ++A++D +A L++VCL+GCG  +G GA  NTAKV PGS  AVFGLG V             SR+I IDI+ +KF +AK  G T+ +NP+D DKP+Q V+ +LT GGVD+S +C G    ++AA++C   GWG+  + G
Sbjct:  159 EANLARVDDEANLERVCLIGCGFTSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDINSEKFPKAKALGATDCLNPRDLDKPVQDVITELTGGGVDFSLDCAGTAQTLKAAVDCTVVGWGSCTVVG 298          
The following BLAST results are available for this feature:
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHL6_ARATH2.806e-3546.81Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADH1S_HORSE2.806e-3551.43Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADH1E_HORSE6.251e-3550.71Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADH1_RABIT8.164e-3551.43Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
ADH4_HUMAN1.393e-3450.00Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADH1_RANPE1.819e-3451.43Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1_PERMA9.026e-3450.00Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADHP_RABIT1.540e-3347.86Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
FADH_PARDE2.626e-3347.26S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADH4_RAT2.626e-3345.71Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00509 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00509 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623418 ID=BQ623418; Name=BQ623418; organism=Citrus sinensis; type=EST; length=435bp
CATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGT
ATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACA
CTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACT
GTTGGCCTTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGT
TATTGGTATAGATATTGACCCGAAAAAGTTTGATAGAGCAAAGAATTTTG
GAGTTACTGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAG
GTCCTTGTCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCAT
TGGCAATGTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCT
GGGGAACATCAGTTATTGGTGGGTGTTGCTGCATC
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