BQ623418

Overview
NameBQ623418
Unique NameBQ623418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:664..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.430e-33
Identity = 65/139 (46.76%), Postives = 89/139 (64.03%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK-PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +V KID   P  + CLL CGV TG+GA W TAKVE GS V +FGLG++             SR+IG+DI+P KF   + FGVTEFVN    +K  + +V+ ++TDGG DY FEC+G+ S+++ A  CC +GWG ++  G
Sbjct:  169 NVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLG 307          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.430e-33
Identity = 67/146 (45.89%), Postives = 92/146 (63.01%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD------GGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            +++VAK+ P AP DK+C +GCGV TG+GAV NTAKVE G+   VFGLG +               +IG+D++  K +  + FG+T FVNP + D  +   LV++T       GG DY+F+C GNV VMR ALE CH+GWG S++ G
Sbjct:  150 EIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVIQGLKLAGADMIIGVDLNNAKKEWGERFGMTHFVNPSEIDGDVVAHLVNMTKTPFDQIGGADYTFDCTGNVKVMRQALEACHRGWGQSIVIG 295          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.430e-33
Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            ++SVAKID  APL+KVC++GCG  TG GA  N+AKV PGS  AVFGLG V             +R+I +DI+  +F +AK  G T+ V+P+D +KPI++VL D+ DGGVD+ FE  GN   + AAL  CHK  G  V  G
Sbjct:  155 EISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFAKAKTVGATDCVDPRDFEKPIEEVLSDMIDGGVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.480e-33
Identity = 71/142 (50.00%), Postives = 85/142 (59.86%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPK--DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+SV K+  +AP DK CLLGCGV TG GA  NTAK+  G  + VFG G +             S +I IDI+  K   A  FG T+FVNP        I   L+D+TDGG DY+F+C GNV VMR ALE CHKGWG S+I G
Sbjct:  156 DISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVNPTTLPEGTNIVDYLIDITDGGFDYTFDCTGNVQVMRNALESCHKGWGESIIIG 297          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 4.480e-33
Identity = 64/140 (45.71%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            + ++A++D +A L++VCL+GCG  +G GA  NTAKV PGS  AVFGLG V             SR+I IDI+ +KF +AK  G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G    ++AA++C   GWG+  + G
Sbjct:  159 EANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVG 298          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 7.641e-33
Identity = 71/138 (51.45%), Postives = 86/138 (62.32%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            SVAKID +AP +K CL+GCG  TG GA   TAKV PGS  AVFGLG V             SR+IGIDI+  KF +A + G TE +NP+D  KPI +VL D+T   V Y+FE IG +  M  AL  CH  +GTSV+ G
Sbjct:  156 SVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGIDINKDKFQKALDVGATECINPRDFTKPISEVLSDMTGNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVG 293          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.223e-32
Identity = 61/137 (44.53%), Postives = 90/137 (65.69%), Query Frame = 1
Query:   13 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            V K+DP  PL+K+ LL CGV TG+GA WN A ++P S VA+FGLG V             S++IGIDI+P KF   +  G++EF+NPK+ DK + + ++++T+GGV+YSFEC G++  +R A    + G G +V+ G
Sbjct:  163 VLKVDPLFPLEKISLLSCGVSTGVGAAWNVADIQPASTVAIFGLGAVGLAVAEGARARGASKIIGIDINPDKFQLGREAGISEFINPKESDKAVHERVMEITEGGVEYSFECAGSIEALREAFLSTNSGVGVTVMLG 299          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 3.792e-32
Identity = 64/140 (45.71%), Postives = 90/140 (64.29%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+++AKID  A L +VCL+GCG  TG GA  N AKV PGS  AVFGLG V             SR+I +DI+  KF +AK  G T+ +NP++ +KP+Q V+V++T+GGVD++ +C G   VM+A ++C   GWG+    G
Sbjct:  160 DINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVFGLGGVGLSAVIGCKTAGASRIIAVDINSDKFAKAKALGATDCLNPRELNKPVQDVIVEMTNGGVDFAIDCAGGSEVMKATVDCTTVGWGSCTFVG 299          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 6.469e-32
Identity = 69/140 (49.29%), Postives = 89/140 (63.57%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D++VAKIDP+APL+  CL+GCG  TG GA  NTAKV PGS  AVFGLG V             SR+IG+     KF +A   G TE +NPKD+DKPI +V+ + T+GGVDY+ EC G +  M  AL+  + G G +V+ G
Sbjct:  155 DIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLG 293          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.458e-31
Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 1
Query:   10 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            SVAKID  AP +KVCL+GCG  TG GA   T KV+PGS   VFGLG V             SR+IGID++  KF++A   G TE ++PKD  KPI +VL ++T   V Y+FE IG++  M  AL  CH  +GTSV+ G
Sbjct:  156 SVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVG 293          
The following BLAST results are available for this feature:
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHL7_ARATH3.430e-3346.76Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADHI_RHOS43.430e-3345.89Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH6_RAT3.430e-3349.29Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
FADH_PICPA4.480e-3350.00S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH4_MOUSE4.480e-3345.71Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH7_RAT7.641e-3351.45Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADHL4_ARATH2.223e-3244.53Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHQ_RABIT3.792e-3245.71Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH8_RANPE6.469e-3249.29NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH7_HUMAN2.458e-3149.28Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00509 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00509 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623418 ID=BQ623418; Name=BQ623418; organism=Citrus sinensis; type=EST; length=435bp
CATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGT
ATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACA
CTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACT
GTTGGCCTTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGT
TATTGGTATAGATATTGACCCGAAAAAGTTTGATAGAGCAAAGAATTTTG
GAGTTACTGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAG
GTCCTTGTCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCAT
TGGCAATGTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCT
GGGGAACATCAGTTATTGGTGGGTGTTGCTGCATC
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