BQ623424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.076e-23 Identity = 80/205 (39.02%), Postives = 108/205 (52.68%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L K G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADP NN Sbjct: 74 PGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVTPELLAKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG----GPLGE---VEDPIYPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.076e-23 Identity = 80/206 (38.83%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYL-GGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D +S DPE F + + L EVI+ R+AMLGA+G + PE+L K GL E WF+ G I G +Y +P ++ ++ LMG E R G++G G + L GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN Sbjct: 75 PGDYGWDTAAVSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYR----VGGGTLGE----GLDPLLPGGAFDPL----------GLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 254
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.625e-23 Identity = 78/205 (38.05%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP ++L DH+ADPVNNN Sbjct: 75 PGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAG--WFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG----GPLGE---IVDPLYPGGSFDPL----------GLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.625e-23 Identity = 79/205 (38.54%), Postives = 109/205 (53.17%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+L + G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FV +VTG GP +NL DHLADPVNNN Sbjct: 37 PGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLSRNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG----GPLGE---VVDPLYPGGSFDPL----------GLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.889e-23 Identity = 82/210 (39.05%), Postives = 107/210 (50.95%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTS 603 PGDYG+D GLS DP+ + E E+I+ R+A+LGA+G + PE+L + AG+ Q WF+ G I G NY + + +++ LMG AE R AN GS G L Y GG DP D + + K+KE+KNGRLAM + LG+FVQ +VTG GP QNL DHLADP N S Sbjct: 59 PGDYGWDTAGLSADPQTFARYREI------ELIHARWALLGALGILTPELLSQYAGV--QFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR----ANGGSEGFLDDLD-TLYPGGPFDPL----------GLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFAS 245
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.030e-22 Identity = 76/204 (37.25%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 7 PGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS T F + + L EVI+ R+ MLGA+G + PE+ + G+ E WF+ G I G +Y +P ++ ++ LMG E R G +G Y GGS DP D ++ + ++KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 75 PGDYGWDTAGLSADPAT--FAKNRKL---EVIHCRWTMLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVID---PLYPGGSFDPL----------GLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.757e-22 Identity = 77/205 (37.56%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE F + + L EVI+GR+AMLGA+G I PE+L K + + + WF+ G I G +Y +P + ++ LMG E R PG G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NLLDHL +PV NN Sbjct: 72 PGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL--PGV--------------GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.295e-22 Identity = 77/206 (37.38%), Postives = 101/206 (49.03%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE + E E+I+ R +LGA+G + PE+L I A WF+ G I G NY +P + +++ LMG E R N G G G + Y G + DP D + + K+KE+KNGRLAM A LG+FVQ +VTG GP +NL DHLA+P NN Sbjct: 81 PGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR----VNGGPAGE----GLDPLYPGEAFDPL----------GLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENN 262
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.295e-22 Identity = 77/205 (37.56%), Postives = 107/205 (52.20%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G + PE+ + G+ E W + G I G +Y +P ++ ++ LMG E R G +G + Y GGS DP +D ++ + K+KE KNGRLAM ++ G+F+Q +VTG GP +NL DHL DPVNNN Sbjct: 76 PGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGVKFGEAV--WLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAG----GPLG---VVVDPLYPGGSFDPL----------GLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNN 255
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.915e-22 Identity = 79/208 (37.98%), Postives = 107/208 (51.44%), Query Frame = 1 Query: 7 PGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGK-AGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKY--LGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 591 PGDYG+D GLS DPE F + L EVI+GR+AMLGA+G + PE+L K G+ +E WF+ G I G +Y +P + ++ LMG E R G G + G + + LG + DP + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL DPV NN Sbjct: 75 PGDYGWDTAGLSADPEA---FARNRAL---EVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGE-GNDLYPGGQYFDPLGLADDPV-----------------TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256 The following BLAST results are available for this feature:
BLAST of BQ623424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623424 ID=BQ623424; Name=BQ623424; organism=Citrus sinensis; type=EST; length=632bpback to top |