BQ623429

Overview
NameBQ623429
Unique NameBQ623429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5616 contig Csv1_Contig5616:104..656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.011e-22
Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 3
Query:    6 DNTVKVWKL---YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN +K+W      NG +K++  P L  HTDWVRDVAW+P + L KS IASAS+D  V IWT  A    +W+ KVL+ F   V+RVSWSL+GN+LA +  NN VTLW+E + GEW  V  +
Sbjct:  187 DNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGEWKCKVLN-FDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTI 302          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_LODEL (Protein transport protein SEC13 OS=Lodderomyces elongisporus GN=SEC13 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.556e-22
Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN VK+WK    +        L+ HTDWVRDVAW+P+  L +  IA+AS+D  V+IWT  ++G +W+ + L + K P   +R SWSL+GNILAV+ G+N VTLW+E + G+W     V
Sbjct:  185 DNLVKIWKYDTALETYAEEAKLEGHTDWVRDVAWSPS-NLVRPYIATASQDCTVLIWTQDKDG-KWQSQPLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVTLWKENLQGKWESAGEV 300          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_ASPOR (Protein transport protein sec13 OS=Aspergillus oryzae GN=sec13 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.117e-21
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWT--VAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN +K+W   +     +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  V+  G QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  178 DNLLKIWDYNSETKSYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDVSNPG-QWASQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 289          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_YEAST (Protein transport protein SEC13 OS=Saccharomyces cerevisiae GN=SEC13 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 335
            DN VK+WK  +          L+ H+DWVRDVAW+P + L +S +AS S+D   IIWT   E   W+  +L + K P  ++R SWSL+GN+LA++ G+N VTLW+E ++G+W
Sbjct:  179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV-LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 289          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_KLULA (Protein transport protein SEC13 OS=Kluyveromyces lactis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 335
            DN VK+WK  +          L+ H+DWVRDVAW+P + L +S +AS S+D   IIWT   + D W+  +L + K P  ++R SWSL+GNILA++ G+N VTLW+E ++G+W
Sbjct:  184 DNLVKIWKYNSDAATYLLEHTLEGHSDWVRDVAWSPTV-LSRSYLASVSQDRTCIIWTQDSKEDTWKKTLLKEDKFPDVLWRASWSLSGNILALSCGDNTVTLWKENLEGKW 294          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V +WT  A    QW  +VL +F   ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  193 DNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLRGQWEKV 304          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.251e-21
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  190 DNLLKIWDYNPESKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 301          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_ASPCL (Protein transport protein sec13 OS=Aspergillus clavatus GN=sec13 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.251e-21
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  179 DNLLKIWDYNPESKTYNITQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 290          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.246e-21
Identity = 55/115 (47.83%), Postives = 74/115 (64.35%), Query Frame = 3
Query:    3 CDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGD-QWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWR 338
            CDN VK+W    G+        L  H DW RDVAWAP++GL K+ +ASAS+D  V IWT  +EGD  W+   L + K P   +RVSWSL+GNILAV+ G+N V L++E+   +W+
Sbjct:  179 CDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWT--KEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYLFKES-QNKWQ 290          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_CANAL (Protein transport protein SEC13 OS=Candida albicans GN=SEC13 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 4.246e-21
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 3
Query:    6 DNTVKVWKL--YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN  K+WK    N  +  +    L+ HTDWVRDVAW+P+  L +S IA+AS+D  V+IWT  R+G +W+ ++L + K P   +R SWSL+GNILAV+ G+N V+LW+E + G+W     V
Sbjct:  181 DNLAKIWKYDAANNTYVEEA--KLEGHTDWVRDVAWSPS-NLIRSYIATASQDRTVLIWTQDRDG-KWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 296          
The following BLAST results are available for this feature:
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
SEC13_NEUCR1.011e-2250.83Protein transport protein sec-13 OS=Neurospora cra... [more]
SEC13_LODEL8.556e-2245.76Protein transport protein SEC13 OS=Lodderomyces el... [more]
SEC13_ASPOR1.117e-2147.83Protein transport protein sec13 OS=Aspergillus ory... [more]
SEC13_YEAST1.459e-2144.64Protein transport protein SEC13 OS=Saccharomyces c... [more]
SEC13_KLULA1.459e-2145.54Protein transport protein SEC13 OS=Kluyveromyces l... [more]
SEC13_EMENI1.459e-2146.49Protein transport protein sec13 OS=Emericella nidu... [more]
SEC13_ASPFU3.251e-2147.37Protein transport protein sec13 OS=Aspergillus fum... [more]
SEC13_ASPCL3.251e-2147.37Protein transport protein sec13 OS=Aspergillus cla... [more]
SEC13_SCHPO4.246e-2147.83Protein transport protein sec13 OS=Schizosaccharom... [more]
SEC13_CANAL4.246e-2145.83Protein transport protein SEC13 OS=Candida albican... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00520 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00520 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623429 ID=BQ623429; Name=BQ623429; organism=Citrus sinensis; type=EST; length=553bp
GTTGTGATAATACCGTGAAGGTGTGGAAGCTGTACAATGGAATTTGGAAG
ATGGACTGCTTTCCAGCTCTTCAAATGCATACTGATTGGGTTAGAGATGT
TGCTTGGGCTCCCAACTTGGGGCTTCCAAAATCTACTATTGCAAGTGCAT
CGGAGGATGGGAAAGTTATTATATGGACTGTGGCCAGGGAAGGAGATCAA
TGGGAAGGTAAGGTGTTGCATGACTTCAAGACCCCTGTTTATAGAGTCAG
CTGGTCACTGACTGGAAACATATTGGCTGTGGCTGATGGAAACAACAATG
TAACACTGTGGGAAGAAGCAGTGGATGGGGAGTGGCGACAGGTGACTGCA
GTTGGGCCGTAAGACTCTTTTAAGTTTTTCAAATTTTTATCGTGAAATAC
AAGATTGCATTTTAGAACCTCTTTATAATTTCTTTTGAGGACCCTAAACC
GCAATCCCCACTCTTTTTATGTTACTGCATAGCTGAGCATCATTGATGGA
TATATCTGAACCCTAAATTTCTTAACTTTAGCTTCAACGAAGAATCTCCT
TTT
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