BQ623434

Overview
NameBQ623434
Unique NameBQ623434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2213 contig Csv1_Contig2213:258..832. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623434 vs. ExPASy Swiss-Prot
Match: GDL9_ARATH (GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana GN=At1g28600 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15
Identity = 61/193 (31.61%), Postives = 95/193 (49.22%), Query Frame = 3
Query:    6 RYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRKL---AIPSFTNFLQALLKRGAKYVVVQGLPTTGCLPLAMYLAPEDDRD----GIGCVKSVNNQSYTHN 560
            R  DGR+++DF+ + + LP++PPY  +K+ N   GVNFAV GATA+  +F  K  +    T  S+  QL  F K L +  C     S   C+    +AL  +GEIG NDY +   +      + +L    I S ++ +  L+  G K  +V G    GC  + + L    ++D      GC+K +N     H+
Sbjct:   73 RSCDGRIIMDFIAEFVGLPYVPPYFGSKNRNFDKGVNFAVAGATALKSSFLKKRGIQ-PHTNVSLGVQLKSFKKSLPNL-C----GSPSDCRDMIGNALILMGEIGGNDYNFPFFNRKPVKEVEELVPFVIASISSTITELIGMGGKTFLVPGEFPIGCSVVYLTLYKTSNKDEYDPSTGCLKWLNKFGEYHS 259          
BLAST of BQ623434 vs. ExPASy Swiss-Prot
Match: GDL8_ARATH (GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana GN=At1g28590 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.800e-15
Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 3
Query:    6 RYSDGRLVIDFVTQSLSLPFLPPYLHNKDNATY--GVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRKL---AIPSFTNFLQALLKRGAKYVVVQGLPTTGCLPLAMYLAPEDDRDG----IGCVKSVNNQSYTHN 560
            RYSDGRL+IDF+ + L  P +PP+ +   NA +  GVNFAV GATA+  +F  +  +   IT  S+  QL  F + L +  C     S   C+   ++AL  +GEIG NDY + L        + +L    I + ++ +  L+  G +  +V G    G     + L    +++      GC+K +N+ S  +N
Sbjct:   78 RYSDGRLIIDFIAEFLGFPLVPPF-YGCQNANFKKGVNFAVAGATALEPSFLEERGIHSTITNVSLSVQLRSFTESLPNL-C----GSPSDCRDMIENALILMGEIGGNDYNFALFQRKPVKEVEELVPFVIATISSAITELVCMGGRTFLVPGNFPIGYSASYLTLYKTSNKEEYDPLTGCLKWLNDFSEYYN 265          
BLAST of BQ623434 vs. ExPASy Swiss-Prot
Match: GDL74_ARATH (GDSL esterase/lipase At5g03980 OS=Arabidopsis thaliana GN=At5g03980 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.723e-13
Identity = 52/157 (33.12%), Postives = 71/157 (45.22%), Query Frame = 3
Query:  108 VNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRKL---AIPSFTNFLQALLKRGAKYVVVQGLPTTGCLPLAMYLAP---EDDRDGIGCVKSVNNQSYTHN 560
            VNF V G+TA+N +FF + NL +  T   +  QL WF   L S        S   C      +LF VGEIG NDY Y        + IR      + + T   + +++ GA  VVV G    GC P+ +   P     D D  GC+  +N  +  HN
Sbjct:   66 VNFGVSGSTALNSSFFSERNLHVPATNTPLSMQLAWFKGHLRS----TCHGSSSDC---LKHSLFMVGEIGGNDYNYGFFQGKPMEEIRSYIPHVVGAITAAAREVIRAGAVNVVVPGNFPVGCFPIYLTSFPVKDTKDYDDNGCLTHLNEFAMDHN 215          
BLAST of BQ623434 vs. ExPASy Swiss-Prot
Match: GDL16_ARATH (GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana GN=At1g31550 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.035e-12
Identity = 58/193 (30.05%), Postives = 92/193 (47.67%), Query Frame = 3
Query:    6 RYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDTIRK---LAIPSFTNFLQALLKRGAKYVVVQGLPTTGC----LPLAMYLAPEDDRDGIGCVKSVNNQSYTHN 560
            R+SDGRL+IDF+ + L LP++PPY  + + N   GVNFAV  ATA+  +F  +          S+  QL  F + L +     ++     C+    +AL  +GEIG NDY +        D +++   L I + ++ +  L+  G +  +V G    GC    L L      E+     GC+K +N     H+
Sbjct:   78 RFSDGRLIIDFIAEFLGLPYVPPYFGSTNGNFEKGVNFAVASATALESSFLEEKGYHCPHN-FSLGVQLKIFKQSLPNLCGLPSD-----CRDMIGNALILMGEIGANDYNFPFFQLRPLDEVKELVPLVISTISSAITELIGMGGRTFLVPGGFPLGCSVAFLTLHQTSNMEEYDPLTGCLKWLNKFGEYHS 264          
BLAST of BQ623434 vs. ExPASy Swiss-Prot
Match: GDL10_ARATH (GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana GN=At1g28610 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12
Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 3
Query:    6 RYSDGRLVIDFVTQSLSLPFLPPYLHNKD-NATYGVNFAVGGATAVNHAFFVKNNLSLDITPQSIQTQLIWFNKFLESKGCKEAESSGPQCQAAFDDALFWVGEIGVNDYAYTLGSSVTSDT--IRKLAIPSFTNFLQALLKRGAKYVVVQGLPTTGCLPLAMYLAPEDDRDG----IGCVKSVNNQSYTHN 560
            R  +GR++IDF+ + L LP +PP+  +K+ N   GVNFAV GATA+  +   K  +    +  S+  QL  F + L +  C     S   C+    +A   +GEIG ND+ +    + TS+   +  L I   ++ +  L+  G +  +V G    GC    + L    +++      GC+  +N+ S  +N
Sbjct:   73 RSCNGRIIIDFIAEFLGLPHVPPFYGSKNGNFEKGVNFAVAGATALETSILEKRGIYYPHSNISLGIQLKTFKESLPNL-C----GSPTDCRDMIGNAFIIMGEIGGNDFNFAFFVNKTSEVKELVPLVITKISSAIVELVDMGGRTFLVPGNFPLGCSATYLTLYQTSNKEEYDPLTGCLTWLNDFSEYYN 259          
The following BLAST results are available for this feature:
BLAST of BQ623434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GDL9_ARATH1.706e-1531.61GDSL esterase/lipase At1g28600 OS=Arabidopsis thal... [more]
GDL8_ARATH3.800e-1531.44GDSL esterase/lipase At1g28590 OS=Arabidopsis thal... [more]
GDL74_ARATH2.723e-1333.12GDSL esterase/lipase At5g03980 OS=Arabidopsis thal... [more]
GDL16_ARATH1.035e-1230.05GDSL esterase/lipase At1g31550 OS=Arabidopsis thal... [more]
GDL10_ARATH5.136e-1228.65GDSL esterase/lipase At1g28610 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00525 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00525 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623434 ID=BQ623434; Name=BQ623434; organism=Citrus sinensis; type=EST; length=575bp
CCAACCGATACTCCGATGGACGGCTGGTGATTGACTTTGTAACTCAATCC
CTGTCACTACCATTCTTGCCACCTTACCTTCACAACAAAGATAATGCAAC
ATATGGTGTCAACTTTGCTGTTGGCGGTGCCACTGCTGTAAATCATGCTT
TCTTTGTCAAAAACAATCTCAGTCTTGACATTACTCCTCAGTCAATCCAA
ACTCAGCTCATTTGGTTCAACAAGTTCTTGGAGAGCAAGGGATGTAAAGA
AGCAGAGTCCTCAGGGCCTCAGTGCCAGGCAGCTTTCGATGATGCATTGT
TCTGGGTTGGTGAAATTGGAGTCAACGATTATGCGTACACTCTAGGATCT
TCTGTTACAAGTGACACTATCCGAAAACTCGCTATCCCTAGTTTTACAAA
TTTTCTGCAGGCGTTGCTTAAAAGAGGAGCAAAATATGTTGTTGTTCAAG
GTCTGCCGACAACAGGATGCTTGCCGCTGGCAATGTATTTGGCCCCTGAA
GACGATAGAGACGGGATAGGCTGTGTAAAAAGTGTGAACAATCAAAGCTA
CACCCATAACCCTTGTTCTTTCAAG
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