BQ623445

Overview
NameBQ623445
Unique NameBQ623445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:724..1416. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.443e-40
Identity = 88/214 (41.12%), Postives = 124/214 (57.94%), Query Frame = 2
Query:    2 WPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEH---RFLFLGAGEAGTGIAELIALEISK---QTKAPVEETRKKICLVDSQGLIVSSRKD 625
            WP   + +IVVTDG RILGLGDLG QG+GI +GKL LY A  GI P   LP+ +DVGT+NE LLKD  Y+GL+  R  G+EY E++DEFM AV   +   V++QFEDF +  AF+LL +Y   + +FNDDIQ                    + +    + +  GAG AG G+       +++    T+   E  R +  +VD++GLI  +R++
Sbjct:  184 WPADQVDMIVVTDGSRILGLGDLGIQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTDNENLLKDPLYLGLQDHRLDGEEYIEVIDEFMEAVFTRW-PHVIVQFEDFQSKWAFKLLQRYRNNYRMFNDDIQGTAGVAIAGLLGAVRAQGRPMIDFPKMKIVVAGAGSAGIGVLNAARKTMARMLGNTEIAFESARSQFWVVDAKGLITEAREN 396          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.219e-38
Identity = 92/213 (43.19%), Postives = 119/213 (55.87%), Query Frame = 2
Query:    2 WPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAE---HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSL 631
            WP   + VIVVTDG RILGLGDLG  GM IP+GKL LY   GGI P   LPI +DVGTNN++LL D  Y+G++  R  G+E+   +DE++SA+   +  K +IQFEDF   NA +LL KY     +FNDDIQ                   T A+     FL LGAG +G G+ E I ++      A  EE   +  + D +GL+   R D L
Sbjct:  172 WPYDDVDVIVVTDGSRILGLGDLGAGGMQIPIGKLTLYVCGGGINPRNVLPIVLDVGTNNKELLNDPLYLGMQHPRLQGEEFHAFVDEWVSAITDRF-PKAVIQFEDFMMPNALDLLLKYKDQICMFNDDIQSTGAITLASVLATMRARGGTFADIKKETFLCLGAGSSGVGVCETI-VDCIVAEGATREEAYAQFYMFDHKGLLGKGRDDLL 382          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.794e-35
Identity = 79/212 (37.26%), Postives = 115/212 (54.25%), Query Frame = 2
Query:    2 WPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAE---HRFLFLGAGEAGTGIAELIALEISK---QTKAPVEETRKKICLVDSQGLIVSSR 619
            WP   + +IVVTDG RILGLGDLG  G+G+ +GKL LY A  GI P   LP+ +DVGTNNE LLK+  Y+GL+++R  G+EY  ++DEFM AV   +   V++QFED  N  A  LL +Y   +  FN D+Q                    + +    + +  GAG +G G+       +++     ++  +  R +  +VD +GLI   R
Sbjct:  181 WPAEQVDMIVVTDGSRILGLGDLGVHGIGVAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEDLLKNPLYLGLQKKRLDGEEYLAVMDEFMEAVFTRW-PNVIVQFEDIQNKWALTLLQRYRHKYRTFNVDVQGTSGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSSGVGVLNAARKTMARMLGNDESAFDRARSQFWVVDDKGLITEKR 391          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 4.059e-34
Identity = 83/213 (38.97%), Postives = 119/213 (55.87%), Query Frame = 2
Query:   17 IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWA 655
            + +IV TD E ILG+GD G  G+ I VGKLALYTA GG+ P  CL +++DVGT+NEQLL D FY+G R  R  G+EY E +  ++   ++ +  + ++ FEDF   NA ++L  YGT + VFNDD+Q                    L +   +  GAG AG GIA+ I  +      A +E+   +I  +D  GL+     D L+ F+ P+A
Sbjct:  141 VDLIVCTDAEAILGIGDWGVGGIQIAVGKLALYTAGGGVDPRRCLAVSLDVGTDNEQLLADPFYLGNRHARRRGREYDEFVSRYIETAQRLF-PRAILHFEDFGPANARKILDTYGTDYCVFNDDMQGTGAVVLAAVYSGLKVTGIPLRDQTIVVFGAGTAGMGIADQIR-DAMVADGATLEQAVSQIWPIDRPGLLFDD-MDDLRDFQVPYA 350          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.542e-33
Identity = 86/203 (42.36%), Postives = 113/203 (55.67%), Query Frame = 2
Query:    8 ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSS 616
            ++ +  IVV+D E ILG+GD G  G+ I + KLAL T  GGI P   LP+ +DVGTNN++L +DE Y+G +  R  G++Y + L++F+ AVK+ Y   VL  FEDF   NA  LL KY      FNDDIQ                    L + R L  GAG AG GIA+ I   +        EE RKKI L+D +GLI+ S
Sbjct:  228 DKDVDYIVVSDSEGILGIGDQGIGGVRIAISKLALMTLCGGIHPGRVLPVCLDVGTNNKKLARDELYMGNKFSRIRGKQYDDFLEKFIKAVKKVYPSAVL-HFEDFGVKNARRLLEKYRYELPSFNDDIQGTGAVVMASLIAALKHTNRDLKDTRVLIYGAGSAGLGIADQIVNHMVTH-GVDKEEARKKIFLMDRRGLILQS 428          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.631e-33
Identity = 81/216 (37.50%), Postives = 117/216 (54.17%), Query Frame = 2
Query:    8 ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWA 655
            +R I++IVVTD E ILG+GD G QG+ I VGKL +YTA  GI P++ LP+ +D GTN ++LL+D  Y+G  Q R  G +Y   +D+F+   +  +  K+ + +EDF   NA  +L  Y T    FNDDIQ                    L +  +L  G G AG GIA  +  E+  +  +  EE  K   ++D QGL+    +D L   +KP+A
Sbjct:  132 DREIRLIVVTDAEGILGIGDWGTQGVDISVGKLMIYTAAAGIDPASVLPVVIDAGTNRKELLEDHLYLGNHQERIYGDQYYSFVDQFVETAESIF-PKLYLHWEDFGRSNAATILNNYKTKIPTFNDDIQGTGIVVLGGIFGSLDITGEKLTDQVYLCYGGGSAGAGIAGRVHAEMVSEGLSE-EEAYKHFFMIDQQGLLFDDMED-LTPAQKPFA 344          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.631e-33
Identity = 79/222 (35.59%), Postives = 118/222 (53.15%), Query Frame = 2
Query:   14 SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            +I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI PS  L + +D GTN E LL D  Y+G +  R  G+ Y + +D++++  ++ +    L+ +EDF   NA  +L +Y      FNDDIQ                    L +HR +  GAG AG GIAE +   + ++  +  EE+ K+   +D  GL+     D L  F+KP+A   + V +
Sbjct:  149 TIDLIVATDAEGILGIGDWGVGGIAISIGKLAVYTAAAGIDPSRVLAVVLDAGTNQESLLNDPLYVGNQHSRVRGERYDQFIDDYVALARETF-PNALLHWEDFGAKNARSILKRYKDKVCTFNDDIQGTGAVSLAAVLSCAKASKVPLRDHRVVIFGAGTAGIGIAEQLREALVREGLSE-EESYKRFWCIDRNGLLTDD-MDQLLDFQKPYARSADEVKD 367          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 81/221 (36.65%), Postives = 116/221 (52.49%), Query Frame = 2
Query:   17 IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI PS  +P+ +DVGTNNE+LL D  YIG +  R  G+ Y   +D ++ A  + +  K L+ +ED  N NA  ++ KY    L FNDDIQ                   ++ + R +  GAG AG GIA+ I  +         EE  K+   +D +GL+    +  L  F+KP+    + V +
Sbjct:  167 IDLIVATDSESILGIGDWGVGGINIAIGKLAVYTAAAGIDPSRVIPVVLDVGTNNEKLLNDPLYIGNKHERVQGERYEAFIDAYVKAALK-FFPKALLHWEDLGNKNARNIMKKYNHEILTFNDDIQGTGAITLAGVLAAMKKTGASIKDQRVVIFGAGSAGIGIADQIR-DTMVLAGLSEEEANKRFYTLDYRGLLTEDIEGILD-FQKPYLRNADEVKD 384          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 81/223 (36.32%), Postives = 118/223 (52.91%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            R I+++VV+D E ILG+GD G QG+ I VGKL +YT   GI PS  L + +D GTNNE+LLKD  Y+G +  R  G +Y + +D+F++  +  +   + + +EDF   NA  +L  Y      FNDDIQ                    L +  ++  GAG AG GI + +  E+ +Q  +  EE +K   LVD QGL+     D L   +KP+A +     N
Sbjct:  134 RDIKLLVVSDAEGILGIGDWGVQGVDIAVGKLMVYTVAAGIDPSTVLAVVIDAGTNNEKLLKDPMYLGNKFNRVRGDKYYDFIDKFVNHAESLF-PNLYLHWEDFGRSNASNILNSYKDKIATFNDDIQGTGIVVLAGVLGALKISGQKLTDQTYMSFGAGTAGMGIVKQLHEEMVEQGLSD-EEAKKHFFLVDKQGLLFDDDPD-LTPEQKPFAAKRSDFKN 353          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.197e-27
Identity = 74/213 (34.74%), Postives = 107/213 (50.23%), Query Frame = 2
Query:   14 SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPW 652
            S++ I++TD E ILG+GD G  G+ I V K  L T   G+ P+  LPI +DVGTNNE   K+  Y+GLR+ R  G++Y   LD  + A+++ + E   I FEDF   NA  +L  Y      FNDDIQ                    L E R +  GAG AG GIA  I   +     + +++ R  + ++D  GL++          +KP+
Sbjct:  148 SVEYIIITDSEGILGIGDQGVGGVLISVAKGHLMTLCAGLDPNRFLPIVLDVGTNNETHRKNHQYMGLRKDRVRGEQYDSFLDNVIKAIREVFPE-AFIHFEDFGLANAKRILDHYRPDIACFNDDIQGTGAVALAAIIGALHVTKSPLTEQRIMIFGAGTAGVGIANQIVAGMVTDGLS-LDKARGNLFMIDRCGLLLERHAKIATDGQKPF 358          
The following BLAST results are available for this feature:
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOM_SOLTU8.443e-4041.12NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOH_NEOFR1.219e-3843.19Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAOM_AMAHP4.794e-3537.26NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAOX_MYCTU4.059e-3438.97Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAOM_YEAST1.542e-3342.36NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MLES_LACLA2.631e-3337.50Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAO3_BACSU2.631e-3335.59Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO2_BACSU4.487e-3336.65Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MLES_OENOE3.799e-3236.32Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAOX_SCHPO8.197e-2734.74NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00536 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00536 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623445 ID=BQ623445; Name=BQ623445; organism=Citrus sinensis; type=EST; length=693bp
CTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCA
TTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGG
AAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCATGTTT
GCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAGGATG
AATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATATGCT
GAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAGAAAA
AGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAGTTGC
TTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACAGGGT
ACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGATTGG
TGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAGGCTG
GGACTGGTATAGCTGAACTTATTGCGCTTGAGATATCAAAGCAGACTAAA
GCTCCTGTGGAAGAGACCCGGAAGAAGATATGTCTTGTAGACTCACAGGG
ACTGATAGTCAGCTCCCGGAAAGATTCACTTCAACACTTCAAGAAGCCTT
GGGCTCATGAACATGAGCCTGTCAACAATCTCTTAGATGCTGT
back to top