BQ623445

Overview
NameBQ623445
Unique NameBQ623445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:724..1416. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHESM (NAD-dependent malic enzyme OS=Shewanella sp. (strain MR-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 97/212 (45.75%), Postives = 131/212 (61.79%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  +  E+ R ++C+VD  GL++ +  + L   +K
Sbjct:  142 QKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKERYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRVAFLGAGSAGCGIAEAIVAQMVSEGISD-EQARSQVCMVDRWGLLLDNMPNLLPFQQK 351          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHEON (NAD-dependent malic enzyme OS=Shewanella oneidensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 97/212 (45.75%), Postives = 131/212 (61.79%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N QLL+D  Y+G R  R  G+EYAE ++ FM AV   + +  LIQFEDFA  NA  +L +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  +  E+ R ++C+VD  GL++ +  + L   +K
Sbjct:  142 QKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPQLLEDPMYMGWRHPRIGGEEYAEFIEAFMQAVHVRWPD-TLIQFEDFAQKNAMPILERYKERYCCFNDDIQGTAAVTVGSLLAACKAAGTELNKQRVAFLGAGSAGCGIAEAIVAQMVSEGISD-EQARSQVCMVDRWGLLLDNMPNLLPFQQK 351          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 98/223 (43.95%), Postives = 140/223 (62.78%), Query Frame = 2
Query:    8 ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVN 676
            ++ ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNNE+LL+D  Y+G R +R    EY E LD+F+ AV + +   V++QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +F+GAG AG GIAE I ++++ +     E+ +++I +VD  GL++ +  D L+ F++  A +   +N
Sbjct:  141 KQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVMLDVGTNNEKLLEDPMYMGARHKRIEQDEYDEFLDKFIKAVTRRW-PGVMLQFEDFAQPNAMPLLRRYRDEVCCFNDDIQGTASVTVGTLLAACRQKGKKLSEQKVVFVGAGSAGCGIAEQIMIQMTAEGLTE-EQAKRQIFMVDRFGLVMDT-MDGLRDFQQALAQKTSDLN 360          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 99/212 (46.70%), Postives = 127/212 (59.91%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            + +++IV+TDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGTNN QLL D  Y+G R  R TGQEY + ++EF+ AVK  +    LIQFEDFA  NA  LL +Y      FNDDIQ                    L+E R  F+GAG AG GIAE I  ++  +  +     R +I +VD  GL+  + ++ L   +K
Sbjct:  142 QDVKIIVITDGERILGLGDQGIGGMGIPIGKLALYTACGGINPANTLPIVLDVGTNNTQLLSDPMYMGWRHPRITGQEYDDFVEEFIQAVKSRW-PNALIQFEDFAQKNAMPLLNRYKDKVCCFNDDIQGTAAVTVGSLLAACKAAGSELSEQRITFVGAGSAGCGIAEAIVAQMIAEGLSD-SAARARIFMVDRWGLLTDNMQNLLDFQQK 351          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.326e-44
Identity = 97/210 (46.19%), Postives = 132/210 (62.86%), Query Frame = 2
Query:   17 IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            ++VIVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N++LL D  Y+G R RR  GQ+YA+ ++ FM AV + + + VLIQFEDFA  NA  LL +Y   +  FNDDIQ                    L++ R +FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+  +  + L   +K
Sbjct:  144 VKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNQELLDDPMYMGWRHRRIEGQDYADFVEAFMEAVHRRWPD-VLIQFEDFAQRNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAASKAANTQLSKQRVVFLGAGSAGCGIAEAIVAQMISEGISEA-QARSQVFMVDRLGLLQDNTANLLPFQQK 351          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 97/209 (46.41%), Postives = 128/209 (61.24%), Query Frame = 2
Query:    5 PERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSL 631
            P  +++VIVVTDGERILGLGD G  GMGIP+GKL+LYT  GGI P+  LPI +DVGTNN+QLL D  Y+G R  R T  EY + +D+ + A+K  + + VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +I ++  +  EE R+++ +VD  GL+     + L
Sbjct:  143 PNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTTCGGISPAYTLPIVLDVGTNNQQLLDDPLYMGWRHPRITDDEYYQFVDDVIQAIKARWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRGAGSQLSEQKIVFLGAGSAGCGIAEQIIAQIVREGLSE-EEARQRVFMVDRFGLLTDGMPNLL 349          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 97/209 (46.41%), Postives = 128/209 (61.24%), Query Frame = 2
Query:    5 PERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSL 631
            P  +++VIVVTDGERILGLGD G  GMGIP+GKL+LYT  GGI P+  LPI +DVGTNN+QLL D  Y+G R  R T  EY + +D+ + A+K  + + VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+E + +FLGAG AG GIAE I  +I ++  +  EE R+++ +VD  GL+     + L
Sbjct:  143 PNHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTTCGGISPAYTLPIVLDVGTNNQQLLDDPLYMGWRHPRITDDEYYQFVDDVIQAIKARWPD-VLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAAVTVGTLIAASRGAGSQLSEQKIVFLGAGSAGCGIAEQIIAQIVREGVSE-EEARQRVFMVDRFGLLTDGMPNLL 349          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHEHH (NAD-dependent malic enzyme OS=Shewanella halifaxensis (strain HAW-EB4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.380e-44
Identity = 97/223 (43.50%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LP+T+DVGT+N  LL+D  Y+G+R  R  G+EY E ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQ                    L+E R  FLGAG AG GIAE I  ++  +  +   + RK++ +VD  G++  S   +L  F++  A + + + N
Sbjct:  142 QKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPVTLDVGTDNPHLLEDPMYMGMRSPRIGGEEYKEFVEAFMQAVNRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKSKLSEQRITFLGAGSAGCGIAEAIVAQMVSEGISEA-QARKQVFMVDRWGML-QSNMPNLLPFQQKLAQQCDDLTN 361          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.638e-44
Identity = 104/235 (44.26%), Postives = 137/235 (58.30%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFK---------KPWAHEHEPVNNLLD 688
            ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG EYA+ +++F+ AV++ + E  L+QFEDFA  NA  LL +Y      FNDDIQ                   +L+E R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+     + L   +         K W  E EP  +L+D
Sbjct:  142 QNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYMGWRHPRVTGDEYADFVEDFIQAVQRRWPE-ALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLSEQRVTFLGAGSAGCGIAEAIIAQMVSEGISDA-QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKDWVSE-EPNFSLVD 373          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPA (NAD-dependent malic enzyme OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.638e-44
Identity = 96/212 (45.28%), Postives = 131/212 (61.79%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G+R  R  G+EY E ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQ                    L+E R  FLGAG AG GIAE I  ++  +  +   + RK++ +VD  G++ S+  + L   +K
Sbjct:  142 QKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGMRSPRIGGEEYTEFVEAFMQAVHRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAKTQLSEQRITFLGAGSAGCGIAEAIVAQMVSEGISEA-QARKQVFMVDRWGMLQSNMPNLLPFQQK 351          
The following BLAST results are available for this feature:
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHESM2.536e-4445.75NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEON2.536e-4445.75NAD-dependent malic enzyme OS=Shewanella oneidensi... [more]
MAO1_IDILO3.313e-4443.95NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO12_PHOPR3.313e-4446.70NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]
MAO1_SHEDO4.326e-4446.19NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MAO1_KLEP75.650e-4446.41NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_KLEP35.650e-4446.41NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_SHEHH7.380e-4443.50NAD-dependent malic enzyme OS=Shewanella halifaxen... [more]
MAO1_VIBF19.638e-4444.26NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SHEPA9.638e-4445.28NAD-dependent malic enzyme OS=Shewanella pealeana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00536 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00536 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623445 ID=BQ623445; Name=BQ623445; organism=Citrus sinensis; type=EST; length=693bp
CTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCA
TTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGG
AAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCATGTTT
GCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAGGATG
AATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATATGCT
GAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAGAAAA
AGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAGTTGC
TTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACAGGGT
ACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGATTGG
TGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAGGCTG
GGACTGGTATAGCTGAACTTATTGCGCTTGAGATATCAAAGCAGACTAAA
GCTCCTGTGGAAGAGACCCGGAAGAAGATATGTCTTGTAGACTCACAGGG
ACTGATAGTCAGCTCCCGGAAAGATTCACTTCAACACTTCAAGAAGCCTT
GGGCTCATGAACATGAGCCTGTCAACAATCTCTTAGATGCTGT
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