BQ623445

Overview
NameBQ623445
Unique NameBQ623445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3937 contig Csv1_Contig3937:724..1416. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43
Identity = 96/199 (48.24%), Postives = 125/199 (62.81%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLI 607
            ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG EYA+ +++F+ AV++ + E  L+QFEDFA  NA  LL +Y      FNDDIQ                   +L+E R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+
Sbjct:  142 QNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYMGWRHPRVTGDEYADFVEDFIQAVQRRWPE-ALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLSEQRVTFLGAGSAGCGIAEAIIAQMVSEGISDA-QARSQVYMVDRWGLL 338          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SODGM (NAD-dependent malic enzyme OS=Sodalis glossinidius (strain morsitans) GN=sfcA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43
Identity = 94/200 (47.00%), Postives = 128/200 (64.00%), Query Frame = 2
Query:    8 ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLI 607
            +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +D GTNN+QLL D  Y+G R  R TG++Y + +D F+ AVK+ +   VL+QFEDFA  NA  LL +Y +    FNDDIQ                    L + + +FLGAG AG GIAE I  E+  +  +  +E R+++ +VD  GL+
Sbjct:  144 KQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDAGTNNQQLLNDPLYMGWRHPRITGEQYDKFVDAFIQAVKRRW-PNVLLQFEDFAQKNATPLLNRYRSELCCFNDDIQGTAAVTLGCLLAASRAAGKRLRDQKVVFLGAGSAGCGIAEQITAEMRTEGLSE-DEARRRVLMVDRFGLL 341          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.259e-43
Identity = 98/223 (43.95%), Postives = 134/223 (60.09%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R  R  G+EY E ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQ                    L + R  FLGAG AG GIAE I  ++  +  A   + RK++ +VD  G++  S   +L  F++  A + + + N
Sbjct:  142 QKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRNPRIGGEEYTEFVEAFMQAVHRRWPD-ALIQFEDFAQKNAMPLLERYKDQYCCFNDDIQGTAAVTVGSLLAACKAAGTQLCQQRITFLGAGSAGCGIAEAIVAQMVSEGIAE-SQARKQVFMVDRWGML-QSNMPNLLPFQQKLAQDCDDITN 361          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.644e-43
Identity = 100/225 (44.44%), Postives = 133/225 (59.11%), Query Frame = 2
Query:    5 PERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN+QLL D  Y+G R  R T  EY + +D+F+ AVK  + + VL+QFEDFA  NA  LL +Y      FNDDIQ                    L+  + +FLGAG AG GIAE I  +  ++  +  E  R ++ +VD  GL+  +  + L  F+     + E + N
Sbjct:  143 PNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLTDPLYMGWRHPRVTDDEYYQFVDDFIQAVKHRWPD-VLLQFEDFAQKNAMPLLNRYRDEICSFNDDIQGTAAVTAGTLIAASRAAGSQLSYQKIVFLGAGSAGCGIAEQIIAQTQREGLSE-ELARSRVFMVDRFGLLTDAMPNLLP-FQTKLVQKRENLKN 364          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHELP (NAD-dependent malic enzyme OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.147e-43
Identity = 94/199 (47.24%), Postives = 127/199 (63.82%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLI 607
            + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R +R  G+EYAE ++ FM AV + + +  LIQFEDFA  NA  LL +Y   +  FNDDIQ                    L++ R  FLGAG AG GIAE I  ++  +  +  E+ R+++ +VD  GL+
Sbjct:  142 QKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRNQRIGGEEYAEFVEAFMEAVHRRWPD-ALIQFEDFAQKNAMPLLERYKDRYCCFNDDIQGTAAVTVGSLLAACQAADSKLSQQRIAFLGAGSAGCGIAEAIIAQMVSEGISD-EQARQQVFMVDRWGLL 338          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.147e-43
Identity = 96/221 (43.44%), Postives = 138/221 (62.44%), Query Frame = 2
Query:   17 IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVNN 679
            +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LPIT+DVGT+N  LL+D  Y+G R  R  G+EY+E ++ FM AV + + + VLIQFEDFA  NA  +L +Y   +  FNDDIQ                    L++ R  FLGAG AG GIAE I  ++  +  +  ++ R ++ +VD  GL++ +  + L  F++  A + + +N+
Sbjct:  144 VKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTDNPHLLEDPMYMGWRHPRIGGEEYSEFIEAFMEAVHRRWPD-VLIQFEDFAQKNAMPILERYKDRYCCFNDDIQGTAAVTVGSLLAACQAAGTKLSDQRITFLGAGSAGCGIAEAIVAQMVSEGISD-DQARSQVFMVDRWGLLLDNMPNLLP-FQQKLAQKIDNINH 361          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.804e-43
Identity = 99/213 (46.48%), Postives = 126/213 (59.15%), Query Frame = 2
Query:    8 ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGTNN Q L D  Y+G R  R TG EY E +DEF+ AVK+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ                    L +    FLGAG AG GIAE I  ++  +  +  E+ R +I +VD  GL+     + L    K
Sbjct:  144 KQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRITGDEYNEFVDEFIQAVKRRW-PNVLLQFEDFAQKNAMPLLNRYRDELCCFNDDIQGTAAVTLGSLIAASRAAGRQLKDQTVAFLGAGSAGCGIAEQIIAQMKSEGLSD-EQARARIFMVDRFGLLTDKLPNLLDFQSK 354          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.663e-43
Identity = 103/235 (43.83%), Postives = 135/235 (57.45%), Query Frame = 2
Query:   11 RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFK---------KPWAHEHEPVNNLLD 688
            ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LPI +DVGTNN Q L D  Y+G R  R TG EY + ++EF+ AV++ +  + L+QFEDFA  NA  LL +Y      FNDDIQ                   +LA+ R  FLGAG AG GIAE I  ++  +  +   + R ++ +VD  GL+     + L   +         K W  E EP  +L D
Sbjct:  142 QNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAHTLPIVLDVGTNNPQRLADPMYMGWRHPRVTGNEYKDFVEEFIQAVQRRW-PQALVQFEDFAQKNAMPLLERYKNRICCFNDDIQGTAAVTVGSLLAACKAAGSSLAQQRVTFLGAGSAGCGIAEAIIAQMVSEGISDA-QARSQVYMVDRWGLLQEGMPNLLDFQQRLVQKAENTKEWVSE-EPNYSLFD 373          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.783e-43
Identity = 102/222 (45.95%), Postives = 136/222 (61.26%), Query Frame = 2
Query:   17 IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAE--LIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKKPWAHEHEPVN 676
            I++IVVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGTNN +LL D  Y+G R  R +G+EY + +  F+ AV++ + + VL+QFEDFA  NA  LL KY      FNDDIQ                   TL + + +F+GAG AG GIAE  + A+ I   +++   E RK+I +VD  GL+  S  D+L  F+K  A +   V+
Sbjct:  144 IKIIVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNRELLDDPMYMGWRHERVSGKEYEDFIALFIDAVQRRWPD-VLLQFEDFAQSNAMPLLEKYRDELCCFNDDIQGTASVAVGTLLAACKAKNETLGQQKVVFVGAGSAGCGIAEHIIAAMRIEGLSES---EARKRIFMVDRFGLLTES-MDNLLDFQKRLAQKTADVS 360          
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.783e-43
Identity = 98/213 (46.01%), Postives = 127/213 (59.62%), Query Frame = 2
Query:    8 ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQXXXXXXXXXXXXXXXXXXXTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSQGLIVSSRKDSLQHFKK 646
            +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+  LP+ +DVGTNN Q L D  Y+G R  R TG+EY E +DEF+ AVK+ +   VL+QFEDFA  NA  LL +Y      FNDDIQ                    L +    FLGAG AG GIAE I  ++  +  +  E+ R +I +VD  GL+     + L    K
Sbjct:  144 KQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPVVLDVGTNNPQRLNDPLYMGWRHPRITGKEYDEFVDEFIQAVKRRW-PNVLLQFEDFAQKNAMPLLNRYRHEICCFNDDIQGTAAVTLGSLIAASRAAGRQLKDQTVTFLGAGSAGCGIAEQIVAQMKSEGLSD-EQARARIFMVDRFGLLTDKLPNLLDFQNK 354          
The following BLAST results are available for this feature:
BLAST of BQ623445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_VIBFM1.259e-4348.24NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_SODGM1.259e-4347.00NAD-dependent malic enzyme OS=Sodalis glossinidius... [more]
MAO1_SHEPW1.259e-4343.95NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_ENT381.644e-4344.44NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAO1_SHELP2.147e-4347.24NAD-dependent malic enzyme OS=Shewanella loihica (... [more]
MAO1_SHEAM2.147e-4343.44NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO1_PROMH2.804e-4346.48NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO1_ALISL3.663e-4343.83NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]
MAO1_PSEU24.783e-4345.95NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO1_PHOLL4.783e-4346.01NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00536 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00536 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623445 ID=BQ623445; Name=BQ623445; organism=Citrus sinensis; type=EST; length=693bp
CTGGCCTGAAAGGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCA
TTTTGGGACTTGGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGG
AAATTGGCTTTGTACACAGCACTTGGAGGCATTCGTCCCTCAGCATGTTT
GCCCATAACCGTTGATGTGGGTACAAACAATGAGCAATTGTTGAAGGATG
AATTCTACATTGGTCTACGACAGAGGAGGGCAACCGGACAGGAATATGCT
GAACTTCTAGATGAATTCATGAGTGCTGTCAAGCAAAATTATGGAGAAAA
AGTTCTTATACAGTTTGAGGATTTCGCAAACCACAATGCTTTTGAGTTGC
TTGCAAAATATGGCACAACTCATCTTGTCTTCAATGATGATATACAGGGT
ACAGCGTCTGTTGTTCTTGCTGGGGTAGTTGCAGCACTGAAGTTGATTGG
TGGCACACTGGCCGAGCATAGATTTTTGTTTCTTGGAGCTGGGGAGGCTG
GGACTGGTATAGCTGAACTTATTGCGCTTGAGATATCAAAGCAGACTAAA
GCTCCTGTGGAAGAGACCCGGAAGAAGATATGTCTTGTAGACTCACAGGG
ACTGATAGTCAGCTCCCGGAAAGATTCACTTCAACACTTCAAGAAGCCTT
GGGCTCATGAACATGAGCCTGTCAACAATCTCTTAGATGCTGT
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