BQ623468

Overview
NameBQ623468
Unique NameBQ623468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6998 contig Csv1_Contig6998:248..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.216e-23
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            L CPRC+STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG   KN
Sbjct:   80 LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 132          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.162e-22
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            + CPRC+STNTKFCYYNNYSL+QPRYFCK CRRYWT+GG+LRNVPVGG   KN
Sbjct:   74 VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKN 126          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF47_ARATH (Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.767e-22
Identity = 41/48 (85.42%), Postives = 46/48 (95.83%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGG 312
            LKCPRCDS NTKFCYYNNYSLSQPR++CK+CRRYWT+GG LRNVP+GG
Sbjct:   41 LKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGG 88          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF34_ARATH (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.532e-22
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            L CPRCDS+NTKFCYYNNY+ SQPR+FCK+CRRYWT GGTLR+VPVGGG  K+
Sbjct:   30 LPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKS 82          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF44_ARATH (Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.285e-21
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query:  175 CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMK 324
            CPRCDS NTKFC+YNNYS SQPRYFCK+CRRYWT GG LRN+PVGG C K
Sbjct:   26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRK 75          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF16_ARATH (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.285e-21
Identity = 41/53 (77.36%), Postives = 49/53 (92.45%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            L CPRC+ST TKFCYYNNY+L+QPRY+CKSCRRYWT+GGTLR+VPVGGG  ++
Sbjct:   29 LPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRS 81          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.738e-21
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            L CPRC+STNTKFCYYNNY+ SQPR+FCKSCRRYWT GGTLR++PVGG   K+
Sbjct:   32 LSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: MNB1A_MAIZE (Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.088e-20
Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query:  175 CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMK 324
            CPRC S +TKFCYYNNY+ SQPR+FCK CRRYWTKGGTLRNVPVGGG  K
Sbjct:   49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRK 98          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF1A_ARATH (Dof zinc finger protein DOF1.10 OS=Arabidopsis thaliana GN=DOF1.10 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.133e-20
Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            + CPRC+S NTKFCYYNNY+++QPRYFC++C+RYWT GG++RNVPVG G  KN
Sbjct:  132 IPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKN 184          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.571e-19
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            L CPRC+S  TKFCYYNNY+++QPR+FCK C+RYWT GGT+RNVPVG G  KN
Sbjct:  138 LPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKN 190          
The following BLAST results are available for this feature:
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF25_ARATH5.216e-2383.02Dof zinc finger protein DOF2.5 OS=Arabidopsis thal... [more]
DOF37_ARATH1.162e-2281.13Dof zinc finger protein DOF3.7 OS=Arabidopsis thal... [more]
DOF47_ARATH5.767e-2285.42Dof zinc finger protein DOF4.7 OS=Arabidopsis thal... [more]
DOF34_ARATH7.532e-2279.25Dof zinc finger protein DOF3.4 OS=Arabidopsis thal... [more]
DOF44_ARATH1.285e-2182.00Dof zinc finger protein DOF4.4 OS=Arabidopsis thal... [more]
DOF16_ARATH1.285e-2177.36Dof zinc finger protein DOF1.6 OS=Arabidopsis thal... [more]
DOF58_ARATH3.738e-2177.36Dof zinc finger protein DOF5.8 OS=Arabidopsis thal... [more]
MNB1A_MAIZE1.088e-2082.00Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A... [more]
DOF1A_ARATH4.133e-2069.81Dof zinc finger protein DOF1.10 OS=Arabidopsis tha... [more]
DOF52_ARATH1.571e-1971.70Dof zinc finger protein DOF5.2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00559 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00559 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623468 ID=BQ623468; Name=BQ623468; organism=Citrus sinensis; type=EST; length=674bp
AAAATTCAACTTTGTTTCAATTATTCTGAAGACTGTTTGATTATTGTTGC
ATGGATGGATGCTTCAAGTGGACAACATCAGGAAATGGCTACTCATTCAT
TGGAAAGCATGTTGGTTTGCTCAAAAGCACAACAAGAAAGGAAGCCAAGG
CCTCAACCAGAACAAGCTCTCAAATGCCCAAGATGTGACTCCACCAACAC
AAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGATACTTCT
GCAAATCTTGCAGGAGGTATTGGACCAAAGGCGGCACACTCAGAAATGTT
CCGGTGGGTGGAGGGTGCATGAAAAACAAACGGTCGTCATCCTCGTCATC
AAAGAGAAGCCAAGATCAACCATTGATGAGTTCCAACACAAGCCCTCTCA
CCAATTTCCCTCCCTTGAGTTATGACACCAATGACTTGAGTCTTGCATTT
GCTAGGCTCCAAAAGCAAAACGGTGGGCAACTAGGGTTTGACGATCAGCA
TGATTTTTCTATTTTGGGGAACCCAGTAAGTAGCCACTGTGACATTCTTG
GAAACCCTAGCATTAGCAGCAGCACTTCAGCTACAACAACCCCAGCATTT
CTTGATGCACTAAGAAGTGGATTCCTAGACACCCACAACAATTTTCAGAA
TTTGTATTATGGGGTTTGGGAATG
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