BQ623470

Overview
NameBQ623470
Unique NameBQ623470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length640
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3393 contig Csv1_Contig3393:1016..1654. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.228e-37
Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 3
Query:   12 ALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAING 470
            +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G
Sbjct:  390 SIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTG 542          

HSP 2 Score: 30.4166 bits (67), Expect = 3.228e-37
Identity = 13/35 (37.14%), Postives = 21/35 (60.00%), Query Frame = 1
Query:  478 PVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNPL 582
            P+ T     + ++N+  ++  FV GCVAF LDN +
Sbjct:  538 PLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTI 572          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.479e-37
Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 3
Query:   12 ALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAING 470
            +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G
Sbjct:  387 SIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTG 539          

HSP 2 Score: 30.4166 bits (67), Expect = 5.479e-37
Identity = 13/35 (37.14%), Postives = 21/35 (60.00%), Query Frame = 1
Query:  478 PVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNPL 582
            P+ T     + ++N+  ++  FV GCVAF LDN +
Sbjct:  535 PLVTGITGIDQVLNVLLTTAMFVGGCVAFILDNTI 569          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.479e-37
Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 3
Query:   12 ALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAING 470
            +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G
Sbjct:  388 SIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMVGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTG 540          

HSP 2 Score: 30.4166 bits (67), Expect = 5.479e-37
Identity = 13/35 (37.14%), Postives = 21/35 (60.00%), Query Frame = 1
Query:  478 PVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNPL 582
            P+ T     + ++N+  ++  FV GCVAF LDN +
Sbjct:  536 PLVTGITGIDQILNVLLTTAMFVGGCVAFILDNTI 570          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.136e-37
Identity = 69/153 (45.10%), Postives = 102/153 (66.67%), Query Frame = 3
Query:   12 ALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAING 470
            +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+V SRRV+Q  A FM+   ++GKF A+FAS+P P++ AL+C  F  + A GLS LQF +LNS R  F+LGFSIF GL +P Y  +   + G
Sbjct:  388 SIIESIGDYYACARLSCAPPPPIHAINRGIFIEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVASRRVIQYGAAFMLLLGMIGKFSALFASLPDPVLGALFCTLFGMITAVGLSNLQFVDLNSSRNLFVLGFSIFFGLMLPSYLKQNPLVTG 540          

HSP 2 Score: 28.4906 bits (62), Expect = 7.136e-37
Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 1
Query:  478 PVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDNPL 582
            P+ T     + ++N+  ++  FV GC AF LDN +
Sbjct:  536 PLVTGIAEIDQVLNVLLTTAMFVGGCTAFILDNTI 570          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.182e-36
Identity = 79/151 (52.32%), Postives = 94/151 (62.25%), Query Frame = 3
Query:    3 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEY 455
            SFV L ESTG F+A ARY                                      +N GLLA+T+VGSRRV+QISA FM+FFS+ GKFGA FASIP PI+A+LYC+   +V + GLSFLQFCNLNSF  KFILGFS F+ +S+PQYF EY
Sbjct:  280 SFVTLFESTGLFYASARYG-------------------------------------KNVGLLAMTKVGSRRVIQISAAFMLFFSIFGKFGAFFASIPLPIMASLYCIVLCFVSSAGLSFLQFCNLNSFNTKFILGFSFFMAISIPQYFREY 393          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 3.490e-36
Identity = 68/149 (45.64%), Postives = 100/149 (67.11%), Query Frame = 3
Query:    3 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFN 449
            +   ++ES G ++A AR A A P P   ++RG+  +GI  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+    +GKF A+FAS+P PI+  ++C  F  + A GLS LQF ++NS R  F+LGFS+F GL++P Y +
Sbjct:  335 TLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLD 483          

HSP 2 Score: 29.261 bits (64), Expect = 3.490e-36
Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 1
Query:  475 GPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDN 576
            G ++T     + ++ +  ++E FV GC+AF LDN
Sbjct:  487 GAINTGIPEVDQILTVLLTTEMFVGGCLAFILDN 520          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.490e-36
Identity = 67/149 (44.97%), Postives = 100/149 (67.11%), Query Frame = 3
Query:    3 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFN 449
            +   ++ES G ++A AR A A P P   ++RG+  +G+  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+    +GKF A+FAS+P PI+  ++C  F  + A GLS LQF ++NS R  F+LGFS+F GL++P Y +
Sbjct:  335 TLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLD 483          

HSP 2 Score: 29.6462 bits (65), Expect = 3.490e-36
Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 1
Query:  475 GPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDN 576
            G ++T     + ++ +  ++E FV GC+AF LDN
Sbjct:  487 GAINTGVPEVDQILTVLLTTEMFVGGCLAFILDN 520          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 6.392e-35
Identity = 67/147 (45.58%), Postives = 98/147 (66.67%), Query Frame = 3
Query:    3 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQY 443
            +   ++ES G ++A AR A A P P   ++RG+  +GI  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  A  M+    +GKF A+FAS+P PI+  ++C  F  + A GLS LQF ++NS R  F+LGFS+F GL++P Y
Sbjct:  328 TLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNY 474          

HSP 2 Score: 28.1054 bits (61), Expect = 6.392e-35
Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 1
Query:  475 GPVHTSGRWFNDMVNIPFSSEPFVAGCVAFFLDN 576
            G ++T     + ++ +  ++E FV GC+AF LDN
Sbjct:  480 GAINTGILEVDQILIVLLTTEMFVGGCLAFILDN 513          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 5.956e-26
Identity = 61/151 (40.40%), Postives = 94/151 (62.25%), Query Frame = 3
Query:    3 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEY 455
            S +A V+S G++ A +   ++ P    V+SR +G +G   +L+GL+GT  G++   EN   +A+T++GSRRVV++ A  ++ FS++GK G   ASIP  +VA+L C  +A   A GLS L++    S R   I+G S+F  LSVP YF +Y
Sbjct:  455 SVIASVDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRVVELGACVLVIFSLVGKVGGFLASIPQVMVASLLCFMWAMFTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSVPAYFQQY 605          
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24
Identity = 58/155 (37.42%), Postives = 93/155 (60.00%), Query Frame = 3
Query:    3 SFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAIN 467
            S VA V+S G + + +   +A      ++SRG+  +G   LL+G++G+  G++   EN   + +T+V SRR + I A F+I  S LGK GA+ ASIP  + A++ C  +A   + GLS L++    SFR   I+G S+F+GLS+P YF +Y  ++
Sbjct:  460 SLVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHTINITKVASRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFIWALTVSLGLSNLRYTQTASFRNITIVGVSLFLGLSIPAYFQQYQPLS 614          
The following BLAST results are available for this feature:
BLAST of BQ623470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
S23A2_HUMAN3.228e-3745.10Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A2_RAT5.479e-3745.10Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A2_MOUSE5.479e-3745.10Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A2_XENTR7.136e-3745.10Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
NAT9_ARATH2.182e-3652.32Putative nucleobase-ascorbate transporter 9 OS=Ara... [more]
S23A1_MOUSE3.490e-3645.64Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A1_RAT3.490e-3644.97Solute carrier family 23 member 1 OS=Rattus norveg... [more]
S23A1_HUMAN6.392e-3545.58Solute carrier family 23 member 1 OS=Homo sapiens ... [more]
NAT12_ARATH5.956e-2640.40Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH2.502e-2437.42Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00561 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00561 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623470 ID=BQ623470; Name=BQ623470; organism=Citrus sinensis; type=EST; length=640bp
CCTCCTTTGTTGCTCTTGTTGAGTCAACTGGTGCTTTTTTTGCGGTAGCA
CGGTATGCAAGTGCAACTCCAATGCCACCTTCTGTTCTCAGCCGTGGTGT
GGGTTGGCAGGGAATTGGCATTTTGCTTTCTGGGTTATTTGGAACTGTAA
ACGGAACATCGGTGTCTGTAGAGAATGCTGGTCTTTTGGCCTTGACTAGA
GTTGGCAGTCGAAGGGTTGTCCAAATATCTGCTGGATTCATGATATTCTT
CTCTGTTCTTGGGAAATTTGGAGCAGTCTTTGCTTCAATTCCAGCACCGA
TTGTTGCTGCTTTATATTGCCTTTTCTTTGCATATGTGGGTGCTGGAGGT
CTTAGCTTCCTTCAGTTCTGTAACCTCAACAGTTTCCGAGTAAAGTTCAT
ATTAGGCTTCTCTATCTTCATCGGTCTGTCTGTGCCCCAATACTTCAATG
AGTACACTGCCATTAATGGGTTTCGGTCCAGTTCACACTAGTGGAAGATG
GTTCAACGATATGGTAAACATTCCTTTCTCGTCAGAACCATTTGTTGCTG
GGTGTGTGGCATTTTTCCTCGACAACCCACTGCATAAAAAGGATGGTCAA
GTCAGGAAAGACAGGGGTAGGCATTGGTGGGGACAAGTTC
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