BQ623472

Overview
NameBQ623472
Unique NameBQ623472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10330 contig Csv1_Contig10330:459..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32
Identity = 79/223 (35.43%), Postives = 128/223 (57.40%), Query Frame = 1
Query:    1 GVNVDKT-LFWRDYLKIHVHPQFNAPQNPL---GFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLD---NENRPPLYRGIKYREYLQLQQSNQLNGK 645
            GV V+ T + W     +   P  N  Q P     + E ++++ KR+ +LA ELL  + E+LGLE+SY++         +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  DG+WI V P   S VVN+GD +E+++NGKYKSV+HR +     TR+S+A+ + P  D ++ PA  L+D    E+   +Y    + +Y++L  + +   K
Sbjct:   76 GVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDYMKLYANLKFQAK 298          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.834e-32
Identity = 72/189 (38.10%), Postives = 115/189 (60.85%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNE---NRPPLYRGIKYREYLQLQQSNQLNGK 645
            + E ++++ KR+ +LA ELL  + E+LGLE+ Y++KA       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  DG+WI V P   S VVN+GD +E+++NGKYKSVLHR +     TR+S+A+ + P  D V+ PA  L++ E       +Y    + +Y++L    +   K
Sbjct:  110 YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKLYAGLKFQAK 298          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.077e-31
Identity = 68/186 (36.56%), Postives = 110/186 (59.14%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGK 645
            + + ++E+  ++ ELA ELL  + E+LGLE+ Y++KA       +    V+ YPPCP+PE++ GL  H+D G + +L Q+D V GL +  D +WI V P   S V+N+GD +E+++NGKYKSV+HR +      R+S+A+ + P  D V+ PA  LL       +Y    + +Y++L    +   K
Sbjct:  110 YRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLLKENETSEVYPKFVFDDYMKLYMGLKFQAK 295          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31
Identity = 77/228 (33.77%), Postives = 122/228 (53.51%), Query Frame = 1
Query:   13 DKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLH--VRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNI 675
            ++ L+W+D L    HP         P+ P  + E + +Y   VR+L   +L  I E LGL+  Y     D E    Q+++ N YPPCP P   +G   H D  L+T+L Q D  GL   +  D  WI V P P +FVVN+G  +++++N K++  +HR V +    R+S+AT  GP     + PA++LL N++ PPLY+   Y E+  +  S++ +  S +   K+N+
Sbjct:  123 EEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYF----DNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ-DLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELL-NQDNPPLYKPYSYSEFADIYLSDKSDYDSGVKPYKINV 344          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31
Identity = 70/188 (37.23%), Postives = 114/188 (60.64%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDN--ENRPPLYRGIKYREYLQLQQSNQLNGK 645
            + E ++++ KR+ +LA ELL  + E+LGLE+ Y++K        +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  DG+WI V P   S VVN+GD +E+++NGKYKSV+HR +     TR+S+A+ + P  D V+ PA  L++   E    +Y    + +Y++L    +   K
Sbjct:  110 YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31
Identity = 76/214 (35.51%), Postives = 121/214 (56.54%), Query Frame = 1
Query:   22 LFWRDYLKIHVHPQFNAPQNP---LGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDN--ENRPPLYRGIKYREYLQLQQSNQLNGK 645
            L W     +   P  N  Q P     + E ++++ KR+ +LA ELL  + E+LGLE+ Y++ A       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  D +WI V P   S VVN+GD +E+++NGKYKSVLHR +     TR+S+A+ + P  D V+ PA+ L++   E    +Y    + +Y++L    +   K
Sbjct:   84 LDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.092e-31
Identity = 72/179 (40.22%), Postives = 104/179 (58.10%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGP 543
            WR+ +    +P  +      P  P G+ +  +EY  ++  LA  LL  + E++GLE   + KA     D  Q +VVN YP CPQP++ +GL  H+D G +T+L+Q+   GL    DG   WI V P PG+FVVN+GDH   LSNG++K+  H+AVVN + +R+S+AT   P  D  V P
Sbjct:  128 WREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKAC---VDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYP 303          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.092e-31
Identity = 73/179 (40.78%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHD-GK-WIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGP 543
            WR+ +    +P  N      P  P G+ +  +EY +R+  LA +LL+ + E++GLE+  +  A     D  Q +VVN YP CPQP++ +GL  H+D G +T+L+Q+   GL    D GK WI V P  G+FVVN+GDH   LSNG++K+  H+AVVN  ++R+S+AT   P  D  V P
Sbjct:  127 WREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNAC---VDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYP 302          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 77/200 (38.50%), Postives = 120/200 (60.00%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            P +P  F ET+++Y   ++++A  L   + ++LGLE   + K +    +    L+ ++   C +    +GL PHSD   LT+L+Q + V GLH++ D KW+P+ P  G+FVVNIGD +EI+SNG YKS+ HRAV+N    R+S+A  H P   T +GP  DL+  +     Y+ I Y +YL    + +L+GKS LD +K+
Sbjct:  159 PTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDELLPSM-SSCGEG---LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV--KENGVKYKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQNPLGFSETI-----------QEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRP 576
            W++ L    H +  AP     FS T+           Q+YC+ ++EL+  +++ +  SLG+E  Y ++      DS  ++  N YPPCP+PE  +G  PH D   LTIL+Q+D  GL V  DG+W PV+P PG+ V+NIGD    LSNG+YKS LHRAVVN +  R S+A    P  D VV P       ++ P
Sbjct:  153 WKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFF---ADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYP 343          
The following BLAST results are available for this feature:
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO2_SOLLC3.701e-3235.431-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO3_PETHY4.834e-3238.101-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO_PEA1.077e-3136.561-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
HY6H_HYONI3.133e-3133.77Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO_TOBAC3.133e-3137.231-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO1_SOLLC3.133e-3135.511-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
FL3H_DIACA4.092e-3140.22Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_ARATH4.092e-3140.78Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
NCS1_COPJA5.345e-3138.50S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
GAOX2_ORYSJ5.345e-3139.69Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00563 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00563 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623472 ID=BQ623472; Name=BQ623472; organism=Citrus sinensis; type=EST; length=681bp
GGCGTTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCA
CGTCCATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTGAAA
CCATACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTG
AAAGGGATTATGGAAAGCTTAGGATTGGAAGAAAGCTACATACAAAAGGC
AATGGATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACC
CTCCTTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCCCCTCATTCGGAT
CATGGCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGT
ACGGCACGATGGCAAATGGATTCCCGTCAATCCTCCACCCGGCTCTTTCG
TAGTCAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAG
AGCGTGTTGCACAGAGCAGTAGTGAACGGCAAAGCAACAAGAATCTCCGT
TGCAACAGCACACGGGCCTCCTCTTGACACGGTCGTGGGCCCTGCTCAGG
ATTTGCTTGACAATGAGAACCGACCCCCGTTGTATCGTGGGATCAAATAT
AGAGAGTATTTGCAGCTTCAACAGAGCAATCAACTGAATGGGAAATCCTG
CTTGGACCACGTCAAAGTCAATATCAATGAT
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