BQ623472

Overview
NameBQ623472
Unique NameBQ623472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10330 contig Csv1_Contig10330:459..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQNPLGFSETI-----------QEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRP 576
            W++ L    H +  AP     FS T+           Q+YC+ ++EL+  +++ +  SLG+E  Y ++      DS  ++  N YPPCP+PE  +G  PH D   LTIL+Q+D  GL V  DG+W PV+P PG+ V+NIGD    LSNG+YKS LHRAVVN +  R S+A    P  D VV P       ++ P
Sbjct:  153 WKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFF---ADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYP 343          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 69/179 (38.55%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLL--DNENRPPLYRGIKYREYLQL 618
            + E ++++ KR+ +LA ELL  + E+LGLE+ Y++KA       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  D +WI V P   S V+N+GD +E+++NGKYKSV HR +     TR+S+A+ + P  D V+ PA  L+  D E    +Y    + +Y++L
Sbjct:  110 YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKL 288          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 66/187 (35.29%), Postives = 114/187 (60.96%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENR-PPLYRGIKYREYLQLQQSNQLNGK 645
            + +T++E+   + +LA +LL  + E+LGLE+ Y++KA       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  DG+W+ V P   S V+N+GD +E+++NGKYKS++HR +     TR+S+A+ + P  D  + PA  LL+ ++   P Y    + +Y++L    +   K
Sbjct:  110 YRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDYMKLYSGLKFQAK 296          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 69/188 (36.70%), Postives = 113/188 (60.11%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDN--ENRPPLYRGIKYREYLQLQQSNQLNGK 645
            + E ++++ KR+ +LA ELL  + E+LGLE+ Y++ A       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  DG+WI V P   S VVN+GD +E+++NGKYKSV+HR +      R+S+A+ + P  D V+ PA  L++   E    +Y    + +Y++L    +   K
Sbjct:  110 YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAK 297          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.345e-31
Identity = 66/187 (35.29%), Postives = 113/187 (60.43%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENR-PPLYRGIKYREYLQLQQSNQLNGK 645
            + +T++E+   + +LA +LL  + E+LGLE+ Y++K        +    V+ YPPCP+P+++ GL  HSD G + +L Q+D V GL +  DG+W+ V P   S V+N+GD +E+++NGKYKSV+HR +     TR+S+A+ + P  D+ + PA  +L+ +    P Y    + +Y++L    +   K
Sbjct:  110 YRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVITNGKYKSVMHRVIAQSDGTRMSIASFYNPGNDSFISPAPAVLEKKTEDAPTYPKFVFDDYMKLYSGLKFQAK 296          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.117e-31
Identity = 71/180 (39.44%), Postives = 109/180 (60.56%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            P+NP  + E  +EY K +R++A+ + + +   LGLE   + +A   E D   +L +N YPPCP+P++ +G+  H+D   +T+L+ N+   + V  DG W  VN  P + +V+IGD +EILSNGKYKSV HR  VN   TR+S      P  +  VGP  +L+ NE  PP ++  KY++Y+
Sbjct:  166 PKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSE-DIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVPNE---VQVFKDGHWYDVNYIPNAIIVHIGDQVEILSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLI-NEANPPKFKTKKYKDYV 340          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.191e-30
Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKA---MDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            P + L + E I+EY + +++LA +L+   + SLG+EE  IQ A    D +  +  ++ +N YP CP+P+  MGL  H+D  L+TIL QN+  GL V R D  W+   P PGS VVN+GD + IL+NG + SVLHRA VN   +R S+A   GPP D ++ P   L+D   + PLY  + +++YL
Sbjct:  150 PSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQ-GTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLVD-PLQSPLYPSLTWKQYL 331          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.191e-30
Identity = 73/203 (35.96%), Postives = 118/203 (58.13%), Query Frame = 1
Query:   22 LFWRDYLKIHVHPQFNAPQNP---LGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQL 618
            L W     +   P  N  Q P     + E ++++ KR+ +LA ELL  + E+LGLE+ Y++ A       +    V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  D +WI V P   S VVN+GD +E+++NGKYKSV+HR +     TR+S+A+ + P  D V+ PA  L++   +  +Y    + +Y++L
Sbjct:   84 LDWESTFFLRHLPTSNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEESKQ--VYPKFVFDDYMKL 284          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.555e-30
Identity = 71/179 (39.66%), Postives = 108/179 (60.34%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGK-WIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGP 543
            WR+ +    +P  N      P  P G+++  +EY +++  LA +LL+ + E++GLE+  +  A     D  Q +VVN YP CPQP++ +GL  H+D G +T+L+Q+   GL   R DG  WI V P  G+FVVN+GDH   LSNG++K+  H+AVVN  ++R+S+AT   P  +  V P
Sbjct:  126 WREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNAC---VDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYP 301          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30
Identity = 67/180 (37.22%), Postives = 107/180 (59.44%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            P NP  + E  +EY   +R + ++L + +   +GLE+  ++KA   + D   +L +N YPPCP+P++ +G+  H+D   +TIL+ N+  GL V  D  W  V   P + +++IGD +EI+SNGKYKSV HR  VN   TR+S      PP + + GP   L+ +EN P  ++  KY++Y+
Sbjct:  151 PNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGD-DLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDEN-PAKFKTKKYKDYV 328          
The following BLAST results are available for this feature:
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAOX2_ORYSI5.345e-3139.69Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
ACCO4_PETHY5.345e-3138.551-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO2_MALDO5.345e-3135.291-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_PETHY5.345e-3136.701-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_MALDO5.345e-3135.291-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
FLS_SOLTU9.117e-3139.44Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
G3OX2_ARATH1.191e-3041.85Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO4_SOLLC1.191e-3035.961-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
FL3H_MATIN1.555e-3039.66Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FLS_PETCR2.031e-3037.22Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00563 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00563 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623472 ID=BQ623472; Name=BQ623472; organism=Citrus sinensis; type=EST; length=681bp
GGCGTTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCA
CGTCCATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTGAAA
CCATACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTG
AAAGGGATTATGGAAAGCTTAGGATTGGAAGAAAGCTACATACAAAAGGC
AATGGATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACC
CTCCTTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCCCCTCATTCGGAT
CATGGCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGT
ACGGCACGATGGCAAATGGATTCCCGTCAATCCTCCACCCGGCTCTTTCG
TAGTCAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAG
AGCGTGTTGCACAGAGCAGTAGTGAACGGCAAAGCAACAAGAATCTCCGT
TGCAACAGCACACGGGCCTCCTCTTGACACGGTCGTGGGCCCTGCTCAGG
ATTTGCTTGACAATGAGAACCGACCCCCGTTGTATCGTGGGATCAAATAT
AGAGAGTATTTGCAGCTTCAACAGAGCAATCAACTGAATGGGAAATCCTG
CTTGGACCACGTCAAAGTCAATATCAATGAT
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