BQ623472

Overview
NameBQ623472
Unique NameBQ623472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10330 contig Csv1_Contig10330:459..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.830e-29
Identity = 73/219 (33.33%), Postives = 119/219 (54.34%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQN-PLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN-GKATRISVA---TAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            WRD     + P    PQ+ P    + + EY K+V  L   L + + E+LGLE +++    D++     L++ + YPPCP+P++ +G   HSD+  LT+L+ +   GL VR +G W  V    G+ ++NIGD +++++N K+ S+ HR + N     R+SVA   T    P   + GP ++L+  EN PP YR    ++Y     +  L+G S L H K+
Sbjct:  155 WRDTFSCTMAPDTPKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLN---DMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEEN-PPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29
Identity = 67/188 (35.64%), Postives = 111/188 (59.04%), Query Frame = 1
Query:   97 ETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLL--VVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDN--ENRPPLYRGIKYREYLQLQQSNQLNGK 645
            + ++E+ +++ +LA ++L  + E+LGLE+ Y++ A    T         V+ YPPCP+PE+  GL  H+D G L +L Q+D V GL +  DG+W+ V P   S V+N+GD +E+++NGKYKSV+HR V      R+S+A+ + P  D V+ PA  L++   E +  +Y    + +Y+ L    +   K
Sbjct:  111 KVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDYMNLYAGLKFQAK 298          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.534e-29
Identity = 69/189 (36.51%), Postives = 110/189 (58.20%), Query Frame = 1
Query:  100 TIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLL--VVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLL----DNENRPPLYRGIKYREYLQLQQSNQLNGK 645
            T++E+ + + +LA  LL  + E LGLE+ Y+++     +D        V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  D +WI V P   S VVNIGD +E+++NGKYKSVLHR V      R+S+A+ + P  D V+ PA  L+    + E +  +Y    +++Y+ L    +   K
Sbjct:  115 TMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAK 303          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29
Identity = 62/179 (34.64%), Postives = 108/179 (60.34%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREY 609
            P+NP  + E  +EY   V++L+  LL  + + LGL+   +++ +  E   + ++ +N YPPCP+P++ +G+P H+D   +T+L+ N+  GL V  D  W      P + +V+IGD +  LSNG+YK+VLHR  V+ + TR+S      PP + +VGP  +L  ++N PP ++   +++Y
Sbjct:  149 PKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEY-MMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDN-PPKFKPFAFKDY 325          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29
Identity = 72/223 (32.29%), Postives = 125/223 (56.05%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQN-PLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDT-------VVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVN 672
            WRD ++  ++     PQ  P    + + +Y   VR L   L + + E+LGL+ ++++   +++     +L+ + YP CPQPE+  G   HSD G LTILMQ+   GL +  + +WI V   PG+ V+NI D +++++N K+KSV HR + N    RISVA A G    T       + GP ++L+  EN PP+Y+ +  ++++ ++ + + +  S L   ++N
Sbjct:  182 WRDTMECIMNSNQPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLE---EMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEEN-PPIYKEVTVKDFITIRFAKRFDDSSSLSPFRLN 400          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28
Identity = 65/159 (40.88%), Postives = 96/159 (60.38%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGP 543
            P  P G+    QEY +++  LA +LL+ + E++ L++  +  A     D  Q +VVN YP CPQP++ +GL  H+D G +T+L+Q+   GL    DG   WI V P  G+FVVN+GDH   LSNG++K+  H+AVVN   +R+S+AT   P  +  V P
Sbjct:  148 PDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNAC---VDMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYP 303          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28
Identity = 63/178 (35.39%), Postives = 107/178 (60.11%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLD-NENRPPLYRGIKYREYLQL 618
            + + ++E+  ++  L+ +LL  + E+LGLE++Y++ A            V+ YPPCP+P+++ GL  H+D G + +L Q+D V GL +  DG W+ V P   S VVN+GD +E+++NGKYKSV+HR +      R+S+A+ + P  D V+ PA  L++  E +   Y    + +Y+ L
Sbjct:  116 YRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFYNPGSDAVIYPAPTLVEKEEEKCRAYPKFVFEDYMNL 293          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28
Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNIND 681
            P  P    E +  Y    R +A E+L+ + E LGL   +    +   +    ++ +N YPP P P   +GLPPH D  L+T+L+     GL + + G WI V P P S V+N G  +E+++NG  K+V HRA  N    R+SVA+   P  D VVGPA++ +  +N PP YR +   E+   ++ N +N  S ++ + +NIN+
Sbjct:  138 PHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDI---SGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPGAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASFIVPADDCVVGPAEEFVSEDN-PPRYRTLTVGEF--KRKHNVVNLDSSINQI-ININN 333          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.901e-28
Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNA---PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPP---------LYRGIKYR 603
            W     +   PQ N    P     +   ++++ KR+  LA +LL  + E+LGLE+ Y++K             V+ YP CP+PE++ GL  H+D G + +L Q+D V GL +  DG WI V P   S V+N+GD +E+++NG+YKS++HR V   +  R+S+A+ + P  D  + PA  L   E   P         LY G+K++
Sbjct:   89 WESTFYLRHLPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKETEYPSFVFDDYMKLYAGVKFQ 293          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.483e-28
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGP 543
            P  P G+    + Y   +  LA +LL+ + E++GLE+  + KA     D  Q ++VN YP CPQP + +GL  H+D G +T+L+Q+   GL    DG   WI V P  G+FVVN+GDH   LSNG++K+  H+AVVN  ++R+S+AT   P  +  V P
Sbjct:  148 PDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKAC---VDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYP 303          
The following BLAST results are available for this feature:
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCH3_ARATH3.830e-2933.331-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO_PERAE6.534e-2935.641-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO2_DORSP6.534e-2936.511-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
FLS1_ARATH8.533e-2934.64Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
DV4H_CATRO8.533e-2932.29Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
FL3H_VITVI1.114e-2840.88Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
ACCO_DIACA1.114e-2835.39Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
IDS2_HORVU1.901e-2834.98Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO1_BRAJU1.901e-2834.151-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
FL3H_PETCR2.483e-2840.88Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00563 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00563 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623472 ID=BQ623472; Name=BQ623472; organism=Citrus sinensis; type=EST; length=681bp
GGCGTTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCA
CGTCCATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTGAAA
CCATACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTG
AAAGGGATTATGGAAAGCTTAGGATTGGAAGAAAGCTACATACAAAAGGC
AATGGATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACC
CTCCTTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCCCCTCATTCGGAT
CATGGCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGT
ACGGCACGATGGCAAATGGATTCCCGTCAATCCTCCACCCGGCTCTTTCG
TAGTCAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAG
AGCGTGTTGCACAGAGCAGTAGTGAACGGCAAAGCAACAAGAATCTCCGT
TGCAACAGCACACGGGCCTCCTCTTGACACGGTCGTGGGCCCTGCTCAGG
ATTTGCTTGACAATGAGAACCGACCCCCGTTGTATCGTGGGATCAAATAT
AGAGAGTATTTGCAGCTTCAACAGAGCAATCAACTGAATGGGAAATCCTG
CTTGGACCACGTCAAAGTCAATATCAATGAT
back to top