BQ623472

Overview
NameBQ623472
Unique NameBQ623472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10330 contig Csv1_Contig10330:459..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.435e-28
Identity = 65/180 (36.11%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            P++P  + E  +EY + V+ L+ ++++ + E LGL    I++          ++ +N YPP P  +   GL PH+D   LT+++ N+  GL V  D  WI V   P + +VNIGD + +LSNGKYK+VLH+  V+ + TR+S      P  D VVGP  + L +E+ PP ++ I Y++Y+
Sbjct:  106 PKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV----NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIITNEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPE-LTSEDDPPKFKPIAYKDYV 280          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.232e-27
Identity = 65/182 (35.71%), Postives = 99/182 (54.40%), Query Frame = 1
Query:    7 NVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVV 537
            N    L W DY    + P+        P+ P  +     EY  ++R LA ++L  +   LGLEE  ++K +    +      +N YP CPQPE+ +G+  H+D   LT ++ N   GL + ++GKW+     P S +++IGD +EILSNGKYKS+LHR +VN +  RIS A    PP + ++
Sbjct:  138 NASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKII 319          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27
Identity = 74/220 (33.64%), Postives = 117/220 (53.18%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQN-PLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATA-----HGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            WRD    ++ P    PQ+ P    + + EY K+V  L   L + + E+LGL  ++++   D+E      ++ + +PPCP+P++  G   HSD   LT+L+ ++  GL V  +G W  V   PG+ ++NIGD +++++N K+ S+ HR + N +ATR  V+ A     H  P   V GP ++L+  EN PP YR    R+Y        L G S L   KV
Sbjct:  155 WRDTFYCYMAPDPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLK---DMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLAN-RATRARVSVACFFHTHVKPNPRVYGPIKELVSEEN-PPKYRETTIRDYATYFNGKGLGGTSALLDFKV 369          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.115e-27
Identity = 68/178 (38.20%), Postives = 98/178 (55.06%), Query Frame = 1
Query:   97 ETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSN 630
            E    YC  +  L+ E+++ + ESLG+  ++ ++  +    +  ++ +N YPPC +P   +G  PH D   LTIL Q++  GL V  +G+W  + P   +FVVNIGD    LSNG+YKS LHRAVVN K  R S+A    P +D VV P   L+D  N P  Y    +R  L   Q +
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFE---GNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAAN-PRAYPDFTWRSLLDFTQKH 335          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27
Identity = 66/187 (35.29%), Postives = 112/187 (59.89%), Query Frame = 1
Query:  103 IQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAV--VNGKATRISVATAHGPPLDTVVGPAQDLLDNE---NRPPLYRGIKYREYLQLQQSNQLNGK 645
            ++++  ++ +L+ ELL  + E+LGLE+ Y++K             V+ YPPCP P++V GL  H+D G + +L Q+D V GL +  DG+W+ V P   S VVN+GD +E+++NGKYKSV HR +   +G+  R+S+A+ + P  D+V+ PA +L+  E    +   Y    + +Y++L  + +   K
Sbjct:  114 MKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEG-RMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAK 299          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 1
Query:   97 ETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSN 630
            E    YC  +  L+ E+++ + ESLG+  ++ ++  +    +  ++ +N YPPC +P   +G  PH D   LTIL Q++  GL V  +G+W  + P   +FVVNIGD    LSNG+YKS LHRAVVN +  R S+A    P +D VV P   L+D  N P  Y    +R  L   Q +
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFE---GNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASN-PRAYPDFTWRSLLDFTQKH 335          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 74/220 (33.64%), Postives = 119/220 (54.09%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQN-PLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVN-GKATRISVAT----AHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            WRD L   + P     Q+ P    E + EY K V +LA  + + + E+LGL  ++++   +++      ++ + +PPCP+P    G   H+D   LTIL+ +++ GL V +DG WI V P P + + N+GD ++++SN K+ S+ HR + N G+  RISVA         P   V GP ++LL +E  PP YR     E      + + NG S LDH+++
Sbjct:  145 WRDTLSCVMAPDVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLK---EMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELL-SELNPPKYRDTT-SESSNHYVARKPNGNSSLDHLRI 359          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 70/185 (37.84%), Postives = 107/185 (57.84%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDN--ENRPPLYRGIKYREYLQLQQSNQLN 639
            F +  QEYC+ +  L+ ++++ +  SLG++  Y ++  + E DS  ++ +N YPPC +P++ +G  PH D   LTIL Q+   GL V  + +W  + P P +FVVNIGD    LSN +YKS LHRAVVN ++ R S+A    P  D VV P ++LLD+    R P +    + E+ Q      +N
Sbjct:  183 FGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFE-ENDS--IMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRYPDFTWSMFLEFTQKHYRADMN 364          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 1
Query:   97 ETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSN 630
            E    YC  +  L+ E+++ + ESLG+  ++ ++  +    +  ++ +N YPPC +P   +G  PH D   LTIL Q++  GL V  +G+W  + P   +FVVNIGD    LSNG+YKS LHRAVVN +  R S+A    P +D VV P   L+D  N P  Y    +R  L   Q +
Sbjct:  162 EVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFE---GNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAAN-PRAYPDFTWRSLLDFTQKH 335          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26
Identity = 73/209 (34.93%), Postives = 110/209 (52.63%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGI-MESLGLEES-YIQKAMDLET-------DSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            W DYL   VHP   A     P  P  +    +++ +R R+LA+ LL  + M  LG +    ++KA+   T       D    L +N YP CPQPE+ +G+  H+D   L+ ++ N   GL V H  +W+     PG+ +V++GD +EILSNG+Y SVLHR +VN +A RIS      PP D+V+      L  E  P  +    ++++L
Sbjct:  152 WEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHL 360          
The following BLAST results are available for this feature:
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FLS_MATIN9.435e-2836.11Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
LDOX_VITVI1.232e-2735.71Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
ACCH2_ARATH2.102e-2733.641-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GAO1B_WHEAT6.115e-2738.20Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
ACCO1_ARATH7.987e-2735.291-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
GAO1A_WHEAT1.362e-2637.64Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
GSL_ARATH1.779e-2633.64Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
GAOX1_ARATH1.779e-2637.84Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
GAO1D_WHEAT1.779e-2637.64Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
LDOX_MAIZE3.035e-2634.93Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00563 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00563 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623472 ID=BQ623472; Name=BQ623472; organism=Citrus sinensis; type=EST; length=681bp
GGCGTTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCA
CGTCCATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTGAAA
CCATACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTG
AAAGGGATTATGGAAAGCTTAGGATTGGAAGAAAGCTACATACAAAAGGC
AATGGATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACC
CTCCTTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCCCCTCATTCGGAT
CATGGCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGT
ACGGCACGATGGCAAATGGATTCCCGTCAATCCTCCACCCGGCTCTTTCG
TAGTCAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAG
AGCGTGTTGCACAGAGCAGTAGTGAACGGCAAAGCAACAAGAATCTCCGT
TGCAACAGCACACGGGCCTCCTCTTGACACGGTCGTGGGCCCTGCTCAGG
ATTTGCTTGACAATGAGAACCGACCCCCGTTGTATCGTGGGATCAAATAT
AGAGAGTATTTGCAGCTTCAACAGAGCAATCAACTGAATGGGAAATCCTG
CTTGGACCACGTCAAAGTCAATATCAATGAT
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