BQ623472

Overview
NameBQ623472
Unique NameBQ623472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26
Identity = 66/202 (32.67%), Postives = 112/202 (55.45%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGL---EESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNIND 681
            F   ++E+ + +R LA++LL+  + +LGL   + + ++    +       + +N YP CP P+  +GL  H+D G  T ++Q+   GL +   G  +W+ V   PG+ VVN+GD  +IL+NG++ SV HRAVVN ++ RIS+    GPP    V P ++ L     P  YR + + EY+ +++     G S L  V ++ +D
Sbjct:  159 FCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYFLGPPAHVKVAPLREAL--AGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAISTDD 358          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 1
Query:   97 ETIQEYCKRVRELANELLKGIMESLGL--EESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQ 624
            E    YC  +  L+ EL++ + ESLG+  +  +  +      DS  ++ +N YP C +P   +G  PH D   LTIL Q+   GL V  +G+W  + P PG+ VVN+GD    LSN +Y+S LHRAVVN  A R S+A    P +DTVV P ++L+D ++ P +Y    +R  L   Q
Sbjct:  169 EVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDS--IMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVD-DHHPRVYPDFTWRALLDFTQ 343          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 65/202 (32.18%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGL---EESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNIND 681
            F   ++E+ + +R LA++LL+  + +LGL   + + ++    +       + +N YP CP P+  +GL  H+D G  T ++Q+   GL +   G  +W+ V   PG+ VVN+GD  +IL+NG++ SV HRAVVN  + RIS+    GPP    V P ++ L     P  YR + + EY+ +++     G S L  V ++ ++
Sbjct:  159 FCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREAL--AGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAISTDN 358          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 68/187 (36.36%), Postives = 102/187 (54.55%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLD----NENRPPLYRGIKYREYLQLQQSNQLN 639
            F +  QEY + +  L+ ++++ +  SLG+E  Y ++  +   DS  +  +N YP C QPE+ +G  PH D   LTIL Q+   GL V  D KW  + P P +FVVNIGD    L+NG+YKS LHRAVVN +  R + A    P  + VV P ++L++     E + P +    + E+ Q      +N
Sbjct:  182 FGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFE---DSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLEFTQKHYRADMN 365          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 69/189 (36.51%), Postives = 105/189 (55.56%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLD 657
            F +  Q+YC+ +  L+ ++++ +  SLG+   Y +   + E DS  ++ +N YPPC  P++ +G  PH D   LTIL Q+   GL V  D +W  + P P +FVVNIGD    LSNG +KS LHRAVVN ++ R S+A    P  D VV P  D+L+ + +   Y    +  +L+  Q +     + LD
Sbjct:  181 FGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFE-ENDS--IMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-KMKTRKYPDFTWSMFLEFTQKHYRADVNTLD 365          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.383e-25
Identity = 65/202 (32.18%), Postives = 111/202 (54.95%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGL---EESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDG--KWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKVNIND 681
            F   ++E+ + +R LA++LL+  + +LGL   + + ++    +       + +N YP CP P+  +GL  H+D G  T ++Q+   GL +   G  +W+ V   PG+ VVN+GD  +IL+NG++ SV HRAVVN  + RIS+    GPP    V P ++ L     P  YR + + EY+ +++     G S L  V ++ ++
Sbjct:  159 FCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQSLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYFLGPPAHVKVAPLREAL--AGTPAAYRAVTWPEYMGVRKKAFTTGASALKMVAISTDN 358          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.724e-25
Identity = 63/205 (30.73%), Postives = 112/205 (54.63%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAP-------QNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPE---VVMGLPPHSDHGLLTILMQNDHVGLHVR-HDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREY 609
            W +YL ++ +PQ ++P       Q P  F E+++EY K ++E++ ++L+ + E LG+E       M  +  S   L +N YP   +     V +G   H+D  ++++L  N+  GL +   DG W+ V P   SF +N+GD +++++NG++KSV HR + + + +RIS+    GPPL   + P   L+  E    LY+   + +Y
Sbjct:  109 WIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVP-EQDDWLYKEFTWSQY 312          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 65/219 (29.68%), Postives = 116/219 (52.97%), Query Frame = 1
Query:   28 WRDYLKIHV-HPQFNAP------QNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEV-------VMGLPPHSDHGLLTILMQNDHVGLHVR-HDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLN 639
            W +YL ++  H   + P      ++P  F   ++EY   VR++  ++L+ I + LG++       +  + ++  +L +N YPPCP           V+G   H+D  ++++L  N+  GL +  +DG WI V P   SF  N+GD +++++NG++KSV HR + N K +R+S+    GP L   + P   L+DNE+   LY    + EY     +++L+
Sbjct:   95 WVEYLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDE-RLYEEFTWSEYKNSTYNSRLS 312          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.265e-24
Identity = 65/179 (36.31%), Postives = 90/179 (50.28%), Query Frame = 1
Query:   94 SETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSN 630
            S T++++      LA  L + + E  G   S+ ++     T     L +N YPPCP+P  V GL PH+D   LTIL Q+   GL +  D +WI V P P + ++NIGD  +  SNG YKSV HR + N K  R S A    P  D V+  + D        P YR   +RE+ Q  Q +
Sbjct:  152 SSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTC---YLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVIECSSD-------RPAYRNFSFREFRQQVQED 320          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.997e-23
Identity = 73/234 (31.20%), Postives = 117/234 (50.00%), Query Frame = 1
Query:   34 DYLKIHVHP-------QFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQ-------PEVV-------MGLPPHSDHGLLTILMQNDHVGLHVR-HDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            +YL +H +P       +  A  +P+ FS  + +Y K V++L  E+L+   E L + +      +  +  S  LL +N YPP  +       P  +       +G   HSD  +LTIL  N+  GL +  H G WIPV P P  F V +GD +++L+NG++ SV HR + N    R+S+     PPL+ ++ P   ++   + P LYR   + +Y Q   + +L G + LD  KV
Sbjct:  102 EYLLLHSNPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMV-TAHSPCLYRPFTWAQYKQAAYALRL-GDTRLDQFKV 333          
The following BLAST results are available for this feature:
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
G3O23_WHEAT3.964e-2632.67Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
GAOX1_ORYSJ1.967e-2538.20Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G3O22_WHEAT2.569e-2532.18Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aes... [more]
GAOX3_ARATH3.356e-2536.36Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
GAOX2_ARATH4.383e-2536.51Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
G3O21_WHEAT4.383e-2532.18Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
G2OX2_ARATH5.724e-2530.73Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX1_ARATH3.710e-2429.68Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX8_ARATH8.265e-2436.31Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
G2OX2_PEA6.997e-2331.20Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00563 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00563 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623472 ID=BQ623472; Name=BQ623472; organism=Citrus sinensis; type=EST; length=681bp
GGCGTTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCA
CGTCCATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTGAAA
CCATACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTG
AAAGGGATTATGGAAAGCTTAGGATTGGAAGAAAGCTACATACAAAAGGC
AATGGATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACC
CTCCTTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCCCCTCATTCGGAT
CATGGCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGT
ACGGCACGATGGCAAATGGATTCCCGTCAATCCTCCACCCGGCTCTTTCG
TAGTCAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAG
AGCGTGTTGCACAGAGCAGTAGTGAACGGCAAAGCAACAAGAATCTCCGT
TGCAACAGCACACGGGCCTCCTCTTGACACGGTCGTGGGCCCTGCTCAGG
ATTTGCTTGACAATGAGAACCGACCCCCGTTGTATCGTGGGATCAAATAT
AGAGAGTATTTGCAGCTTCAACAGAGCAATCAACTGAATGGGAAATCCTG
CTTGGACCACGTCAAAGTCAATATCAATGAT
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