BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.941e-33
Identity = 69/169 (40.83%), Postives = 104/169 (61.54%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+TR +I IG A+GL YLHE+   KI+HRD+KA NVLLD    A + DFGLAKL D  ++H++T + GT+G++APEY   G  ++K DV+ FG++ LE+++G     + +   +   +L+W              D +LG+++ + E   +L +ALLCT   P  RP
Sbjct:  764 LDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNY-RPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRP 931          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.941e-33
Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            L W  R +I  G A+ L YLHE  +PK++HRD+KA+N+L+DD   A + DFGLAKLLD  +SH+TT V GT G++APEY +TG  +EK+D++ FG+LLLE ITG   +++G+  N+   ++EW              D  L     +  +   L V+L C       RP+
Sbjct:  278 LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVN-LVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPR 446          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.941e-33
Identity = 74/171 (43.27%), Postives = 107/171 (62.57%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA-MLEWXXXXXXXXXXXXXXDREL-GSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW++R  I IGAA+GL YLH  C P+IIHRD+K++N+LLD   EA V DFGLAKLL+  +SH+TT V GT G++APEY+ +G+++EKTDV+ FG+L+LE+++G R  +   S  +KG  ++ W              D    G   + ++   +L +A  C    P  RP
Sbjct:  398 LDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTD--ASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGMQMESLDA--LLSIATQCVSPSPEERP 564          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.941e-33
Identity = 73/178 (41.01%), Postives = 105/178 (58.99%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE-WXXXXXXXXXXXXXXDRELGSNYD----RIEVGEILQVALLCTQYLPVHRPKCPK 523
            LDW  R  I +G A GL+YLHEQ   KIIHRD+KA+N+LLD   +A + DFGLA+      SH++TA+ GT+G++APEYL+ GQ +E  DV+ FG+L+LE++TG +  +   S      + E W              + +  S YD    + E+  ++Q+ LLCTQ +P  RP   K
Sbjct:  419 LDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSGELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSK 596          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.535e-33
Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+TRK+I +G A+GL +LHE+   KI+HRD+KA+NVLLD    A + DFGLAKL D  ++H++T + GT+G++APEY   G  +EK DV+ FG++ LE+++G     F +       +L+W              D  L S+Y   E   +L VAL+CT   P  RP
Sbjct:  774 LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNF-RPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRP 941          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 9.632e-33
Identity = 67/169 (39.64%), Postives = 104/169 (61.54%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+TR ++ IG A+GL YLHE+   KI+HRD+KA NVLLD    A + DFGLAKL +  ++H++T + GT+G++APEY   G  ++K DV+ FG++ LE+++G     + +   +   +L+W              D +LG+++ + E   +L +ALLCT   P  RP
Sbjct:  762 LDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNY-RPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRP 929          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 2.146e-32
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+TR  I +G ARGL+YLHE+   +I+HRDVKA+N+LLD      + DFGLAKL D   +H++T V GT+G++APEY   G  +EKTDV+ FG++ LEL++G R         +K  +LEW              D +L ++++  E   ++ +ALLCTQ     RP
Sbjct:  787 LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSG-RPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRP 953          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.803e-32
Identity = 72/170 (42.35%), Postives = 107/170 (62.94%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSN-YDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TR +IA+GAA+GL YLH  C P+IIHRD+K++N+LLD+  EA + DFG+AK +  S +H +T V GT+G+I PEY  T + +EK+D++ FGI+LLEL+TG +A++   +++Q                     D E+     D   + +  Q+ALLCT+  P+ RP
Sbjct:  742 LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLHQL------ILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERP 905          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 3.660e-32
Identity = 73/169 (43.20%), Postives = 103/169 (60.95%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+TR  I +G ARGL+YLHE+   +I+HRDVKA+N+LLD      V DFGLAKL D   +H++T V GT+G++APEY   G  +EKTDV+ FG++ LEL++G R        ++K  +LEW              D +L + ++  E   ++ +ALLCTQ     RP
Sbjct:  786 LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSG-RPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQL-TEFNMEEGKRMIGIALLCTQTSHALRP 952          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.660e-32
Identity = 67/169 (39.64%), Postives = 104/169 (61.54%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W  R +I +G A G+ YLHE+ + +IIHRD+K +N+LL+D     + DFGLA+L     +H++TA+ GT+G++APEY+  G+ +EK DV+ FG+L++E+ITG R   F   +   G++L+               D  LG N+++IE   +LQ+ LLC Q     RP
Sbjct:  417 LNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAF---VQDAGSILQSVWSLYRTSNVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRP 582          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y5343_ARATH1.941e-3340.83Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH1.941e-3341.18Probable receptor-like protein kinase At2g42960 OS... [more]
FEI1_ARATH1.941e-3343.27LRR receptor-like serine/threonine-protein kinase ... [more]
CRK2_ARATH1.941e-3341.01Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y1765_ARATH2.535e-3342.01Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH9.632e-3339.64Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH2.146e-3242.60Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH2.803e-3242.35LRR receptor-like serine/threonine-protein kinase ... [more]
Y5614_ARATH3.660e-3243.20Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH3.660e-3239.64Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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