BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.945e-25
Identity = 64/170 (37.65%), Postives = 90/170 (52.94%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R  I  G  RG+LYLH+     IIHRD+KA+N+LLD      + DFGLA+    + +   T  V GT G++ PEY++ GQ S K+DV+ FG+L+LE+I G +   F +       ++                D  +G NYD+ EV   + + LLC Q  P  RP
Sbjct:  457 LDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRP 626          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.541e-25
Identity = 69/170 (40.59%), Postives = 95/170 (55.88%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W+ R RI  G ARGLLYLHE    +IIHRD+KA+N+LLD      V DFG+A+L +  ++   T+ V GT G++APEY+  GQ S K+DV+ FG++LLE+I+G +   F        A   W              D  L  N  R E+ +++Q+ LLC Q     RP
Sbjct:  434 LTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNFETEGLPAFAWKRW-----IEGELESIIDPYLNEN-PRNEIIKLIQIGLLCVQENAAKRP 597          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 3.318e-25
Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW+ R +I  G ARG+LYLH+     IIHRD+KA N+LLD      V DFG+A++  +D ++++ T  V GT G++APEY   G+ S K+DV+ FG+L+LE+++GM+     +       ++ +              D   G NY   E+   + +ALLC Q     RP
Sbjct:  438 LDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEAN-TRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRP 607          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.334e-25
Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R +IA+ AA+GL YLH  C P ++HRDVK  N+LL++   A + DFGL++      +SHV+T V GT G++ PEY  T   SEK+DV+ FG++LLE++T     +      ++  + EW              D +L  +YD     +I+++AL C       RP
Sbjct:  659 LTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTD---KTRERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRP 825          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.334e-25
Identity = 59/170 (34.71%), Postives = 97/170 (57.06%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W TR +IA+ AA+GL YLH  C P ++HRDVK  N+LL++  +  + DFGL++      ++HV+T V GT+G++ PEY  T   +EK+DV+ FG++LL +IT    ++  +   +K  + EW              D  L  +Y+   V + +++A+ C     + RP
Sbjct:  671 LNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNR---EKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRP 837          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.334e-25
Identity = 63/171 (36.84%), Postives = 101/171 (59.06%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS--HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W TR +I + AA GL YLH    P I+HRD+K+ N+L+D    A V DFG+AK +D +       + + G+ G+IAPEY  T + +EK+D++ FG+++LE++T  R ++    + +K  +++W              D +L S + + E+ +IL V LLCT  LP++RP
Sbjct:  784 LGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVD--PELGEKD-LVKWVCSTLDQKGIEHVIDPKLDSCF-KEEISKILNVGLLCTSPLPINRP 950          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 4.334e-25
Identity = 62/173 (35.84%), Postives = 89/173 (51.45%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT-AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPKCP 520
            LDW  R  I  G ARG+LYLH+     IIHRD+KA+N+LLD      + DFG+A++     S   T  + GT G+++PEY   G  S K+DV+ FG+L+LE+I+G +   F    +    ++                D  +G +Y   E    + +ALLC Q  P  RP  P
Sbjct:  439 LDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLP 611          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.660e-25
Identity = 62/171 (36.26%), Postives = 100/171 (58.48%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            +LDW+ R RI +GAA+GL YLH  C P I+HRD+KA N+L+    E  + DFGLAKL+D  D    +  V G+ G+IAPEY  + + +EK+DV+ +G+++LE++TG + ++   ++ +   +++W               R   +  +  E+ ++L  ALLC    P  RP
Sbjct:  887 SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID--PTVPEGIHLVDWVRQNRGSLEVLDSTLRS-RTEAEADEMMQVLGTALLCVNSSPDERP 1054          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.660e-25
Identity = 62/171 (36.26%), Postives = 99/171 (57.89%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            +L W  R +I +GAA+GL YLH  C P I+HRD+KA N+L+    E  +GDFGLAKL+D  D +  +  + G+ G+IAPEY  + + +EK+DV+ +G+++LE++TG + ++   +I     +++W                   S  +  E+ + L VALLC   +P  RP
Sbjct:  888 SLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID--PTIPDGLHIVDWVKKIRDIQVIDQGLQARPESEVE--EMMQTLGVALLCINPIPEDRP 1054          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.392e-25
Identity = 62/172 (36.05%), Postives = 93/172 (54.07%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK--LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            LDW  R  I  G  RGLLYLH+     IIHRD+KA+N+LLD      + DFG+A+   +D ++   T  V GT G++ PEY++ GQ S K+DV+ FG+L+LE++ G +   F +  +  G ++                D  +  +YD  EV   + + +LC Q  P  RP+
Sbjct:  433 LDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQ-TGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPE 603          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CRK21_ARATH1.945e-2537.65Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK36_ARATH2.541e-2540.59Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK20_ARATH3.318e-2536.84Putative cysteine-rich receptor-like protein kinas... [more]
Y5188_ARATH4.334e-2536.47Probable LRR receptor-like serine/threonine-protei... [more]
Y5181_ARATH4.334e-2534.71Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH4.334e-2536.84Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
CRK35_ARATH4.334e-2535.84Putative cysteine-rich receptor-like protein kinas... [more]
RCH2_ARATH5.660e-2536.26Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RCH1_ARATH5.660e-2536.26LRR receptor-like serine/threonine-protein kinase ... [more]
CRK31_ARATH7.392e-2536.05Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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