BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.655e-25
Identity = 66/170 (38.82%), Postives = 93/170 (54.71%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  I +GAARGL YLH      IIHRDVK+AN+LLDD   A V DFGL+K   D   +HV+TAV+G+ G++ PEYL+  Q +EK+DV+ FG+++LE++ G   ++      +K  ++EW              D  L       EV +  +V   C     + RP
Sbjct:  581 LSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVID-PSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERP 749          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.261e-24
Identity = 68/175 (38.86%), Postives = 96/175 (54.86%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW----XXXXXXXXXXXXXXDREL--GSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R ++AI  A+ L YLH  C  KI+H DVK  N+LLD+   A+V DFGL+KL+   +S V T +RGT G++APE+L     SEK+DV+ +GI+LLE+I G R++   +    K   LE+                  D+ L   +  D  EV +++ VAL C Q     RP
Sbjct:  205 LSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRSISRVEVKETKKKKLEYFPRIVNQKMRERKIMEIVDQRLIEVNEVDEEEVMKLVCVALWCIQEKSKKRP 379          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.261e-24
Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R  I  G ARG+LYLH+     IIHRD+KA+N+LLD      + DFG+A++  LD +  + T+ + GT G++APEY   GQ S K+DV+ FG+L+LE+I+G +   FG+S   +  +L                D  +  N    EV   + + LLC Q  P  RP
Sbjct:  445 LDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDN-TSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFGESDGAQD-LLTHAWRLWTNKKALDLVDPLIAENCQNSEVVRCIHIGLLCVQEDPAKRP 613          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.261e-24
Identity = 61/164 (37.20%), Postives = 92/164 (56.10%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQ 490
            LDW  R +I  G ARG+LYLH+     IIHRD+KA N+LLD      V DFG+A++  +D ++++ T  V GT G++APEY   GQ S K+DV+ FG+L+ E+I+GM+     +  +    ++ +              D   G NY   ++   + +ALLC Q
Sbjct:  602 LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEAN-TRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQ 764          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.647e-24
Identity = 61/171 (35.67%), Postives = 96/171 (56.14%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            +L W  R RIA   A  L YLH      IIHRD+K AN+LLD    A V DFG ++L+      +TT V+GT+G++ PEY +TG  +EK+DV+ FG++L+EL++G +AL F +    K  ++                D ++ +  ++ E+ E  ++A  CT+ +   RP+
Sbjct:  497 SLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKN-LVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPR 666          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.647e-24
Identity = 63/172 (36.63%), Postives = 94/172 (54.65%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAK--LLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            LDW  R  I  G  RGLLYLH+     IIHRD+KA+N+LLD      + DFG+A+   +D ++ + T  V GT G++ PEY++ GQ S K+DV+ FG+L+LE++ G +   F K  +  G ++                D  +  + D  +V   + + LLC Q  PV RP+
Sbjct:  423 LDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDN-TRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPE 593          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.647e-24
Identity = 68/172 (39.53%), Postives = 100/172 (58.14%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            L W  R ++A+GAA+GL +LHE    ++I+RD KAAN+LLD    A + DFGLAK     D+ HV+T V GT G+ APEY++TG+ + K+DV+ FG++LLELI+G RA++     N+  ++++W               D +LG  Y +        +AL C       RPK
Sbjct:  189 LTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEY-SLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPK 358          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.151e-24
Identity = 58/170 (34.12%), Postives = 94/170 (55.29%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W +R +I + AA GL YLH  C P ++HRD+K  N+LLD   +A + DFGL++     ++ +V+T V GT G++ PEY  T   +EK+D++ FGI+LLE+I+    ++  +   +K  ++EW              D  L  +YD   V + +++A+ C       RP
Sbjct:  671 LSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSR---EKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRP 837          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.151e-24
Identity = 58/169 (34.32%), Postives = 91/169 (53.85%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R +IA+ +A G+ YLH  C PKI+HRDVK+ N+LL +  EA + DFGL++     +    T V GT G++ PEY  T   S K+DV+ FG++LLE+I+G   ++  +   +   ++EW              D  L  +YD     +++++A+ C       RP
Sbjct:  653 LSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSFLIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSR---ENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERP 818          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 2.151e-24
Identity = 65/169 (38.46%), Postives = 99/169 (58.58%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            W+ R +I IGAARGL +LH     ++I+RD KA+N+LLD   +A + DFGLAKL    + SHVTT + GT G+ APEY++TG    K+DVF FG++LLE++TG+ A    +   Q+ ++++W               D+ +   Y      E+ ++ L C +  P +RP
Sbjct:  190 WDLRIKIVIGAARGLAFLHS-LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQE-SLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRP 356          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y2393_ARATH9.655e-2538.82Probable receptor-like protein kinase At2g39360 OS... [more]
Y5005_ARATH1.261e-2438.86Probable receptor-like protein kinase At5g20050 OS... [more]
CRK6_ARATH1.261e-2438.60Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK23_ARATH1.261e-2437.20Putative cysteine-rich receptor-like protein kinas... [more]
WAK2_ARATH1.647e-2435.67Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
CRK32_ARATH1.647e-2436.63Putative cysteine-rich receptor-like protein kinas... [more]
APK2A_ARATH1.647e-2439.53Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y2899_ARATH2.151e-2434.12Probable leucine-rich repeat receptor-like protein... [more]
Y1755_ARATH2.151e-2434.32Probable LRR receptor-like serine/threonine-protei... [more]
CX32_ARATH2.151e-2438.46Probable serine/threonine-protein kinase Cx32, chl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
back to top