BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.809e-24
Identity = 60/170 (35.29%), Postives = 92/170 (54.12%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R+ I  G  RG+LYLH+    KIIHRD+KA+N+LLD      + DFG+A++     +   T  V GT G+++PEY++ GQ S K+DV+ FG+L+LE+I+G +   F +       ++ +              D  +  ++   EV   + + LLC Q  P  RP
Sbjct:  433 LDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRP 602          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.809e-24
Identity = 66/172 (38.37%), Postives = 100/172 (58.14%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            L W  R ++AIGAA+GL +LH+    ++I+RD KAAN+LLD    + + DFGLAK     D +HV+T V GT G+ APEY++TG+ + K+DV+ FG++LLEL++G RA++  K +  + ++++W               D  LG  Y +        +AL C       RPK
Sbjct:  186 LTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSK-VGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPK 355          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.669e-24
Identity = 66/178 (37.08%), Postives = 102/178 (57.30%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH---SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE--FGKSINQKGAMLEW--XXXXXXXXXXXXXXDRELGS--NYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R RIA+G A+G+ YLH  C P I+HRD+K++NVLLD   EA +GDFGLAK+L     +++   T    + G+IAPEY  + +++EK+DV+  GI+L+E++TG    +  FG  ++    M+ W                D +L     ++     ++L++AL CT+  P  RP
Sbjct: 1053 LDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAEMD----MVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERP 1226          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.669e-24
Identity = 60/169 (35.50%), Postives = 90/169 (53.25%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  I IG + GL YLH   + KIIHRD+K +N+LLD      + DFGL + +    +   T + GT+G++APEYL  GQ +EK DV+ FG+L++E++TG +   F +  +   ++L                D  L  ++   E  ++LQ+ LLC Q     RP
Sbjct:  412 LSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTS---SVLYSVWEHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRP 577          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.669e-24
Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR--ALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R +I  G ARG+LYLH+    KIIHRD+KA+N+LLD      + DFGLA +     +   T  + GT  +++PEY   GQ S K+D++ FG+L+LE+I+G +   +      +  G ++ +              D   G NY   EV   + +ALLC Q  P  RP
Sbjct:  444 LDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRP 615          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.792e-24
Identity = 63/171 (36.84%), Postives = 97/171 (56.73%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R +I  G ARG+LYLH+     IIHRD+KA+N+LLD      + DFG+A++  LD ++ + T+ + GT G+++PEY   GQ S K+DV+ FG+L+LE+I+G +   F ++ +    ++ +              D  +  N  R EV   + + LLC Q  P  RP
Sbjct:  431 LDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEEN-TSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQT-DGAHDLVSYAWGLWSNGRPLELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERP 599          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.258e-24
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDD-FCEAIVGDFGLAKL-LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  I +GAA GL YLH   D K+I+RD K++NVLLDD FC  +  DFGLA+   D  ++HVTTA  GT G+ APEY+ TG    K+DV+ FG++L E+ITG R +E  K + ++  +L+W               D  L +NY       + ++A LC +     RP
Sbjct:  190 LPWKKRLEIMLGAAEGLTYLH---DLKVIYRDFKSSNVLLDDQFCPKL-SDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAER-RLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERP 356          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.258e-24
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            +L W  R  IAI  A  + YLH      IIHRD+K  N+LLD+   A V DFG +KL       +TT V+GT+G++ PEY +T   +EK+DV+ FG++L+ELI+G +AL F +    K  +  +              D+ L     R E+ E  +VA+ CT+     RP+
Sbjct:  201 SLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQR-EIHEAARVAVECTRLKGEERPR 370          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.258e-24
Identity = 51/115 (44.35%), Postives = 78/115 (67.83%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-----HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEF 334
            L W  R +IA   A GL YLH    P I HRDVK++N+LLD+   A V DFGL++L+D     +++SH+ T  +GT+G++ PEY    Q ++K+DV+ FG++LLE++T  +A++F
Sbjct:  459 LTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDF 573          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 6.258e-24
Identity = 65/171 (38.01%), Postives = 94/171 (54.97%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R  I  G ARG+LYLH+     IIHRD+KA+N+LLD      + DFG+A++  LD +  + T+ + GT G++APEY   GQ S K+DV+ FG+L+LE+I+G +   F +S   +  +L                D  + +N    EV   + + LLC Q  P  RP
Sbjct:  447 LDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDN-TSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGRKNSSFDESDGAQD-LLTHTWRLWTNRTALDLVDPLIANNCQNSEVVRCIHIGLLCVQEDPAKRP 615          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CRK18_ARATH2.809e-2435.29Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
APK2B_ARATH2.809e-2438.37Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
GSO1_ARATH3.669e-2437.08LRR receptor-like serine/threonine-protein kinase ... [more]
CRK1_ARATH3.669e-2435.50Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
CRK11_ARATH3.669e-2436.63Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK10_ARATH4.792e-2436.84Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
Y5707_ARATH6.258e-2440.70Probable receptor-like protein kinase At5g47070 OS... [more]
WAKLS_ARATH6.258e-2436.84Putative wall-associated receptor kinase-like 16 O... [more]
WAKLQ_ARATH6.258e-2444.35Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK8_ARATH6.258e-2438.01Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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