BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 6.258e-24
Identity = 61/170 (35.88%), Postives = 92/170 (54.12%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R+ I  G  RG+LYLH+    KIIHRD+KA+N+LLD      + DFG+A++     +   TA V GT G+++PEY++ GQ S K+DV+ FG+L+LE+I+G +   F +       ++ +              D  +  +    EV   + + LLC Q  P  RP
Sbjct:  453 LDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRP 622          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.258e-24
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLC 484
            L W  R ++A+GAA+GL +LH   + ++I+RD K +N+LLD    A + DFGLAK     D SHV+T V GT G+ APEYL+TG  + K+DV+ FG++LLEL++G RA++  +   ++  ++EW               D  L   Y   E  ++  ++L C
Sbjct:  173 LSWKLRLKVALGAAKGLAFLHSS-ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERN-LVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRC 332          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.173e-24
Identity = 58/170 (34.12%), Postives = 97/170 (57.06%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            +L W  R R+A+  A  L YLH      IIHRD+K AN+LLD+   A V DFG ++L+      + T V+GT+G++ PEY +TG  +EK+DV+ FG++L+EL++G +AL F +    K  ++ +              D ++ +  ++ E+ +  ++A+ CT+     RP
Sbjct:  503 SLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSK-HIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERP 671          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 8.173e-24
Identity = 65/172 (37.79%), Postives = 100/172 (58.14%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDP-KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  +A+ AA+GL +LH   DP K+I+RD+KA+N+LLD    A + DFGLA+     D S+V+T V GT G+ APEY+S+G  + ++DV+ FG+LLLE+++G RAL+  +   ++  +++W               D  L + Y   E   +  VA+ C  + P  RP
Sbjct:  172 LPWFLRVNVALDAAKGLAFLHS--DPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEEN-LVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRP 340          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.067e-23
Identity = 63/171 (36.84%), Postives = 99/171 (57.89%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W+ R +IA+G A+ L +LH  C P I+H +VK+ N+LLD+  EA + D+GL K L   DS  +T      VG+IAPE      ++SEK DV+ +G++LLEL+TG + +E   S NQ   + ++              DR L   ++  E+ +++++ LLCT   P+ RP
Sbjct:  696 LNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVE-SPSENQVLILRDYVRDLLETGSASDCFDRRL-REFEENELIQVMKLGLLCTSENPLKRP 864          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.067e-23
Identity = 63/172 (36.63%), Postives = 95/172 (55.23%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR-ALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R +I  G ARG+LYLH+     IIHRD+KA N+LL D   A + DFG+A++  +D ++++ T  + GT G+++PEY   GQ S K+DV+ FG+L+LE+I+G + +  +       G ++ +              D     NY   EV   + +ALLC Q     RP
Sbjct:  445 LDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEAN-TRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRP 615          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.067e-23
Identity = 64/166 (38.55%), Postives = 91/166 (54.82%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE---WXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQ 490
            L W+ R  I  G ARGLLYLHE    +IIHRD+KA+N+LLD      V DFG+A+L D  ++   T+ V GT G++APEY + GQ S K+DV+ FG++LLE+I+G    +  K   ++   L    W                   +N    EV +++ + LLC Q
Sbjct:  439 LTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQ 604          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.067e-23
Identity = 61/171 (35.67%), Postives = 92/171 (53.80%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R  I  G  RG+LYLH+     IIHRD+KA+N+LLD      + DFG+A++  +D S ++ T  + GT G++ PEY+  GQ S ++DV+ FG+L+LE+I G       +S      ++ +              D  +  N +  EV   + +ALLC Q+ P  RP
Sbjct:  430 LDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGAN-TKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRP 599          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.394e-23
Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 343
            WN R RIAI  A  L YLH      I HRDVK+ N++LD+   A V DFG ++ +    +H+TT V GTVG++ PEY  + Q ++K+DV+ FG++L+ELITG +++ F +S
Sbjct:  544 WNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRS 654          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.394e-23
Identity = 60/171 (35.09%), Postives = 96/171 (56.14%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            +L W  R +IAI  A  L YLH      IIHRD+K AN+LLD    A V DFG ++L+      + T V+GT+G++ PEY +TG  +EK+DV+ FG++L+EL++G +AL F +  + K  ++ +                E+ +  +  E+ E  ++A  CT+ +   RP+
Sbjct:  502 SLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSK-HLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPR 671          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
CRK17_ARATH6.258e-2435.88Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
APK1A_ARATH6.258e-2438.27Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
WAK4_ARATH8.173e-2434.12Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
BIK1_ARATH8.173e-2437.79Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y1124_ARATH1.067e-2336.84Probable LRR receptor-like serine/threonine-protei... [more]
CRK4_ARATH1.067e-2336.63Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK37_ARATH1.067e-2338.55Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK14_ARATH1.067e-2335.67Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
WAKLH_ARATH1.394e-2345.95Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAK1_ARATH1.394e-2335.09Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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