BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.821e-23
Identity = 57/169 (33.73%), Postives = 91/169 (53.85%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L WN R ++A+G A+ L YLHE C P I+HR+ K+AN+LLD+     + D GLA L  +++  V+T V G+ G+ APE+  +G  + K+DV+ FG+++LEL+TG + L+  ++  ++  +                 D  L   Y    +     +  LC Q  P  RP
Sbjct:  492 LTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRP 660          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.821e-23
Identity = 62/170 (36.47%), Postives = 91/170 (53.53%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT-AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R +I  G ARG+LYLH      IIHRD+KA+N+LLD      + DFG+A++     +   T  + GT G+++PEY   G+ S K+DV+ FG+L+LELITG +   F +  +  G ++ +              D  +  N+   EV   + +ALLC Q     RP
Sbjct:  441 LDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEE-DGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERP 609          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.821e-23
Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R ++A+GAA+GL +LH   +  +I+RD K +N+LLD    A + DFGLAK     D SHV+T + GT G+ APEYL+TG  + K+DV+ +G++LLE+++G RA++  +   ++  ++EW               D  L   Y   E  ++  +AL C  +    RP
Sbjct:  174 LSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQ-KLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRP 342          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.378e-23
Identity = 63/177 (35.59%), Postives = 98/177 (55.37%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTT-AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDREL-------GSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+WN R  I  G ARGLLYLH+    +IIHRD+K +N+LLD      + DFG+A++ +  ++   T  V GT G+++PEY   G  SEK+DVF FG+++LE+++G +   F  +++ +  +L +              D  +        S +   EV + +Q+ LLC Q L  HRP
Sbjct:  622 LNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGF-YNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRP 797          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.378e-23
Identity = 53/115 (46.09%), Postives = 79/115 (68.70%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL---EFG 337
            L W  RK+IA GAA+GL +LH  C P IIHRD+K++NVLLD   EA V DFG+A+L+   D+H++ + + GT G++ PEY  + + + K DV+  G+++LE+++G R     EFG
Sbjct:  935 LGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFG 1049          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.106e-23
Identity = 63/172 (36.63%), Postives = 99/172 (57.56%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDP-KIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEW-XXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R ++A+ AA+GL +LH   DP K+I+RD+KA+N+LLD    A + DFGLA+     + S+V+T V GT G+ APEY+STG  + ++DV+ FG++LLEL+ G +AL+  +   ++  +++W               D  L S Y       +  +A+ C  + P  RP
Sbjct:  167 LSWILRIKVALDAAKGLAFLHS--DPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQN-LVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRP 335          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 3.106e-23
Identity = 62/171 (36.26%), Postives = 93/171 (54.39%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW  R  I  G  RG+LYLH+     IIHRD+KA+N+LLD      + DFG+A++  +D S ++ T  + GT G++ PEY+  GQ S K+DV+ FG+L+LE+I G +   F ++  +   ++ +              D  +  N    EV   + +ALLC Q  P  RP
Sbjct:  461 LDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVAN-TKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRP 630          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.298e-23
Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            L W+ R RI  G ARGL+YLHE    +IIHRD+KA+N+LLD +    V DFG+A+L +   +  VT  V GT G++APEY+     S KTDV+ FG++LLE+ITG
Sbjct:  433 LTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITG 537          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 6.919e-23
Identity = 56/122 (45.90%), Postives = 78/122 (63.93%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 367
            LDW  R  IA+G A+GL YLH +C   +IH DVK  N+LLD   E  + DFGL KLL+   S    + VRGT+G+IAPE++S+   + K DV+ +G++LLEL+TG R  E     ++  +ML
Sbjct:  627 LDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSML 748          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 9.036e-23
Identity = 59/171 (34.50%), Postives = 91/171 (53.22%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R  I IGAARGL YLH      IIHRD+K  N+LLD+   A V DFGL+++     S +HV+T V+GT G++ PEY      +EK+DV+ FG++LLE++   R +       ++  ++ W              D +L ++     + +  ++A+ C Q   + RP
Sbjct:  622 LSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLC-CRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERP 791          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
SRF8_ARATH1.821e-2333.73Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK25_ARATH1.821e-2336.47Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
APK1B_ARATH1.821e-2336.26Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
SRK6_BRAOE2.378e-2335.59Putative serine/threonine-protein kinase receptor ... [more]
BRL2_ARATH2.378e-2346.09Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y3545_ARATH3.106e-2336.63Probable receptor-like protein kinase At3g55450 OS... [more]
CRK12_ARATH3.106e-2336.26Putative cysteine-rich receptor-like protein kinas... [more]
CRK38_ARATH5.298e-2351.43Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
KPRO_MAIZE6.919e-2345.90Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
Y5389_ARATH9.036e-2334.50Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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